Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0288 ATGGGAAACAGTGAGGAAGGGAAGTCTGCTAAAGTTGAAAAGCCCTCTTCACCAGTGACAACGGATCAGGCCAACCAGATCAACCCGACCAATATTCATCTGTATCCTGACTGGGCTGCCATGCAGGCATATTATGGGCCAAGGGTCACCATGCCACCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCCTTACATGTGGCCACCACAGCCTATGATGCCGCCTTATGGGGCGCCTTATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCACCCTGCAGTTCCTATTGGGCCACAATCACATGGTCAAGGAATTCCATCTCCCCCTGCTGCTGGAACTCCTTTAAGCGTGGAGACACCAACCAAATCAACCGGAAATACTGACCAAGGCTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCGAGGTGTTGAAAATAGGCTATCACAGAGCGAGGATACTGAAGGTTCAAGTGATGGAAGTGATGGCAACACTGCTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGCAGGTGGAGATGAGAAGGCTGAGATACAGGCCACTCTACTTCCCAAAGAGACTGCGGTTTCCAATAAGTCGATGGCAATTGTACCTGCCAGTGTTGCAGGAAAAATTGCTGGACCTGTAGTTTCCTCAAGTATGACCACTGCTCTGGAGTTAAGAAACCCTCAGACTGTTCATTCTAAACCAAATCTCACAAACGTTGCCCAATCTGGTGCAGTGATTCCTTCTGAAGCTTGGTTACAGAATGAACGAGAGCTGAAGCGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAGCAGGCTGAGACTGAAGAGCTTGCCCGAAAAGTTGAATCCTTGAATACTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGAGTGAAAATTCTGAGAAACTGAGGGCTGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGGCAGACGGAAGAAATAGTTTTGAACAGCATTGACAGCAAGAGGGCTGCGCCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAATGATAGAACTACAGAGGAAGACAATGATTTTTGTGATGACAAACAGAACTCCAGTGCGAAGCTGCATCAACTACTCGATACGAGTCCTAGGGCTGATGCTGTGGCAGCTGGCTAA 1284 0.4626 MGNSEEGKSAKVEKPSSPVTTDQANQINPTNIHLYPDWAAMQAYYGPRVTMPPYYNSAMAPAHAPHPYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIGPQSHGQGIPSPPAAGTPLSVETPTKSTGNTDQGLMKKLKEFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSDGSDGNTAGANQTRRKRSREGTPTTAGGDEKAEIQATLLPKETAVSNKSMAIVPASVAGKIAGPVVSSSMTTALELRNPQTVHSKPNLTNVAQSGAVIPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVTLKSEINRLSENSEKLRAENAALMEKLKNVQQGQTEEIVLNSIDSKRAAPISTENLLSRVNNSSSNDRTTEEDNDFCDDKQNSSAKLHQLLDTSPRADAVAAG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0288 427 SMART brlzneu 282 346 IPR004827 GO:0003700|GO:0006355
Prci13g0288 427 Pfam bZIP transcription factor 282 344 IPR004827 GO:0003700|GO:0006355
Prci13g0288 427 MobiDBLite consensus disorder prediction 100 133 - -
Prci13g0288 427 MobiDBLite consensus disorder prediction 149 221 - -
Prci13g0288 427 MobiDBLite consensus disorder prediction 167 187 - -
Prci13g0288 427 Gene3D - 285 339 - -
Prci13g0288 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 284 347 IPR004827 GO:0003700|GO:0006355
Prci13g0288 427 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Prci13g0288 427 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 404 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci13g0288 427 MobiDBLite consensus disorder prediction 1 26 - -
Prci13g0288 427 MobiDBLite consensus disorder prediction 381 427 - -
Prci13g0288 427 MobiDBLite consensus disorder prediction 118 133 - -
Prci13g0288 427 Pfam Disordered region downstream of MFMR 132 260 - -
Prci13g0288 427 SUPERFAMILY Leucine zipper domain 285 341 IPR046347 GO:0003700|GO:0006355
Prci13g0288 427 CDD bZIP_plant_GBF1 287 335 IPR045314 GO:0003700|GO:0006355
Prci13g0288 427 Coils Coil 302 357 - -
Prci13g0288 427 MobiDBLite consensus disorder prediction 390 406 - -
Prci13g0288 427 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 289 304 IPR004827 GO:0003700|GO:0006355
Prci13g0288 427 MobiDBLite consensus disorder prediction 284 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0288 Prci-Chr13 1937939 1943664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0288 1 427 bZIP Transcription Factor Family AT2G46270 51.276 6.94e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci13g0288 MFMR_assoc 2.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0288 K09060 - gmx:778133 621.698