LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci13g0286	ATGGGAAACAGTGAGGAAGGGAAGTCTGCTAAAGTTGAAAAGCCCTCTTCACCAGTGACAACGGATCAGGCCAACCAGATCAACCCGACCAATATTCATCTGTATCCTGACTGGGCTGCCATGCAGGCATATTATGGGCCAAGGGTCACCATGCCACCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCCTTACATGTGGCCACCACAGCCTATGATGCCGCCTTATGGGGCGCCTTATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCACCCTGCAGTTCCTATTGCTGGAACTCCTTTAAGCGTGGAGACACCAACCAAATCAACCGGAAATACTGACCAAGGCTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCGAGGTGTTGAAAATAGGCTATCACAGAGCGAGGATACTGAAGGTTCAAGTGATGGAAGTGATGGCAACACTGCTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGCAGGTGGAGATGAGAAGGCTGAGATACAGGCCACTCTACTTCCCAAAGAGACTGCGGTTTCCAATAAGTCGATGGCAATTGTACCTGCCAGTGTTGCAGGAAAAATTGCTGGACCTGTAGTTTCCTCAAGTATGACCACTGCTCTGGAGTTAAGAAACCCTCAGACTGTTCATTCTAAACCAAATCTCACAAACGTTGCCCAATCTGGTGCAGTGATTCCTTCTGAAGCTTGGTTACAGAATGAACGAGAGCTGAAGCGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAGCAGGCTGAGACTGAAGAGCTTGCCCGAAAAGTTGAATCCTTGAATACTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGAGTGAAAATTCTGAGAAACTGAGGGCTGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGGCAGACGGAAGAAATAGTTTTGAACAGCATTGACAGCAAGAGGGCTGCGCCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAATGATAGAACTACAGAGGAAGACAATGATTTTTGTGATGACAAACAGAACTCCAGTGCGAAGCTGCATCAACTACTCGATACGAGTCCTAGGGCTGATGCTGTGGCAGCTGGCTAA	1242	0.4597	MGNSEEGKSAKVEKPSSPVTTDQANQINPTNIHLYPDWAAMQAYYGPRVTMPPYYNSAMAPAHAPHPYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIAGTPLSVETPTKSTGNTDQGLMKKLKEFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSDGSDGNTAGANQTRRKRSREGTPTTAGGDEKAEIQATLLPKETAVSNKSMAIVPASVAGKIAGPVVSSSMTTALELRNPQTVHSKPNLTNVAQSGAVIPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVTLKSEINRLSENSEKLRAENAALMEKLKNVQQGQTEEIVLNSIDSKRAAPISTENLLSRVNNSSSNDRTTEEDNDFCDDKQNSSAKLHQLLDTSPRADAVAAG	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci13g0286	413	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	1	390	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Prci13g0286	413	Pfam	G-box binding protein MFMR	1	99	IPR012900	-
	Prci13g0286	413	SMART	brlzneu	268	332	IPR004827	GO:0003700\|GO:0006355
	Prci13g0286	413	Coils	Coil	288	343	-	-
	Prci13g0286	413	CDD	bZIP_plant_GBF1	273	321	IPR045314	GO:0003700\|GO:0006355
	Prci13g0286	413	MobiDBLite	consensus disorder prediction	376	392	-	-
	Prci13g0286	413	Pfam	Disordered region downstream of MFMR	118	246	-	-
	Prci13g0286	413	MobiDBLite	consensus disorder prediction	270	297	-	-
	Prci13g0286	413	MobiDBLite	consensus disorder prediction	366	413	-	-
	Prci13g0286	413	Gene3D	-	271	325	-	-
	Prci13g0286	413	MobiDBLite	consensus disorder prediction	135	195	-	-
	Prci13g0286	413	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	275	290	IPR004827	GO:0003700\|GO:0006355
	Prci13g0286	413	Pfam	bZIP transcription factor	268	330	IPR004827	GO:0003700\|GO:0006355
	Prci13g0286	413	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	270	333	IPR004827	GO:0003700\|GO:0006355
	Prci13g0286	413	MobiDBLite	consensus disorder prediction	153	173	-	-
	Prci13g0286	413	MobiDBLite	consensus disorder prediction	1	25	-	-
	Prci13g0286	413	SUPERFAMILY	Leucine zipper domain	271	327	IPR046347	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci13g0286	Prci-Chr13	1937936	1943664	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci13g0286	1	413	bZIP Transcription Factor Family	AT2G46270	50.348	1.94e-122	357

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Prci13g0286		MFMR_assoc	2e-25	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci13g0286	K09060		-	gmx:778133	590.882