Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0285 ATGGGAAACAGTGAGGAAGGGAAGTCTGCTAAAGTTGAAAAGCCCTCTTCACCAGTGACAACGGCCAACCAGATCAACCCGACCAATATTCATCTGTATCCTGACTGGGCTGCCATGCAGGCATATTATGGGCCAAGGGTCACCATGCCACCATACTATAACTCAGCCATGGCTCCTGCTCATGCTCCTCACCCTTACATGTGGCCACCACAGCCTATGATGCCGCCTTATGGGGCGCCTTATGCAGCAATATACTCTCATGGAGGTGTTTATCCTCACCCTGCAGTTCCTATTGGGCCACAATCACATGGTCAAGGAATTCCATCTCCCCCTGCTGCTGGAACTCCTTTAAGCGTGGAGACACCAACCAAATCAACCGGAAATACTGACCAAGGCTTAATGAAGAAATTGAAAGAGTTTGATGGACTTGCAATGTCTATTGGCAATGGCAATGCTGAGAGTGCTGAGCGAGGTGTTGAAAATAGGCTATCACAGAGCGAGGATACTGAAGGTTCAAGTGATGGAAGTGATGGCAACACTGCTGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGAGAGGGAACACCAACCACTGCAGGTGGAGATGAGAAGGCTGAGATACAGGCCACTCTACTTCCCAAAGAGACTGCGGTTTCCAATAAGTCGATGGCAATTGTACCTGCCAGTGTTGCAGGAAAAATTGCTGGACCTGTAGTTTCCTCAAGTATGACCACTGCTCTGGAGTTAAGAAACCCTCAGACTGTTCATTCTAAACCAAATCTCACAAACGTTGCCCAATCTGGTGCAGTGATTCCTTCTGAAGCTTGGTTACAGAATGAACGAGAGCTGAAGCGAGAGAGGAGGAAACAGTCAAATCGAGAATCTGCTAGAAGGTCCAGGTTAAGAAAGCAGGCTGAGACTGAAGAGCTTGCCCGAAAAGTTGAATCCTTGAATACTGAGAATGTGACTCTGAAATCAGAAATTAACCGTTTGAGTGAAAATTCTGAGAAACTGAGGGCTGAAAATGCTGCATTAATGGAAAAACTGAAAAATGTGCAACAAGGGCAGACGGAAGAAATAGTTTTGAACAGCATTGACAGCAAGAGGGCTGCGCCGATAAGCACAGAAAACTTGTTATCTAGAGTTAATAATTCCAGTTCTAATGATAGAACTACAGAGGAAGACAATGATTTTTGTGATGACAAACAGAACTCCAGTGCGAAGCTGCATCAACTACTCGATACGAGTCCTAGGGCTGATGCTGTGGCAGCTGGCTAA 1278 0.4624 MGNSEEGKSAKVEKPSSPVTTANQINPTNIHLYPDWAAMQAYYGPRVTMPPYYNSAMAPAHAPHPYMWPPQPMMPPYGAPYAAIYSHGGVYPHPAVPIGPQSHGQGIPSPPAAGTPLSVETPTKSTGNTDQGLMKKLKEFDGLAMSIGNGNAESAERGVENRLSQSEDTEGSSDGSDGNTAGANQTRRKRSREGTPTTAGGDEKAEIQATLLPKETAVSNKSMAIVPASVAGKIAGPVVSSSMTTALELRNPQTVHSKPNLTNVAQSGAVIPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNTENVTLKSEINRLSENSEKLRAENAALMEKLKNVQQGQTEEIVLNSIDSKRAAPISTENLLSRVNNSSSNDRTTEEDNDFCDDKQNSSAKLHQLLDTSPRADAVAAG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0285 425 MobiDBLite consensus disorder prediction 99 131 - -
Prci13g0285 425 MobiDBLite consensus disorder prediction 376 425 - -
Prci13g0285 425 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Prci13g0285 425 MobiDBLite consensus disorder prediction 116 131 - -
Prci13g0285 425 SMART brlzneu 280 344 IPR004827 GO:0003700|GO:0006355
Prci13g0285 425 MobiDBLite consensus disorder prediction 280 315 - -
Prci13g0285 425 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 402 IPR044827 GO:0003700|GO:0006355|GO:0043565
Prci13g0285 425 CDD bZIP_plant_GBF1 285 333 IPR045314 GO:0003700|GO:0006355
Prci13g0285 425 Gene3D - 283 337 - -
Prci13g0285 425 Coils Coil 300 355 - -
Prci13g0285 425 MobiDBLite consensus disorder prediction 388 404 - -
Prci13g0285 425 MobiDBLite consensus disorder prediction 147 216 - -
Prci13g0285 425 MobiDBLite consensus disorder prediction 1 26 - -
Prci13g0285 425 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 287 302 IPR004827 GO:0003700|GO:0006355
Prci13g0285 425 MobiDBLite consensus disorder prediction 165 185 - -
Prci13g0285 425 Pfam Disordered region downstream of MFMR 130 258 - -
Prci13g0285 425 MobiDBLite consensus disorder prediction 280 319 - -
Prci13g0285 425 Pfam bZIP transcription factor 280 342 IPR004827 GO:0003700|GO:0006355
Prci13g0285 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 282 345 IPR004827 GO:0003700|GO:0006355
Prci13g0285 425 MobiDBLite consensus disorder prediction 251 270 - -
Prci13g0285 425 SUPERFAMILY Leucine zipper domain 283 339 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0285 Prci-Chr13 1937933 1943664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0285 1 425 bZIP Transcription Factor Family AT2G46270 51.515 3.09e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci13g0285 MFMR_assoc 2.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0285 K09060 - gmx:778133 612.453