Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0260 ATGTCCTCCTCCGCCGCCGCCGCCTCCTTCCTCTCCAACGTCGGCCTCGGCTACTCCATCGCCATCGCCCTCGCCTTCCTCCTCCTCCTCTCCACCCTCCTCCTCTCTTCCTACCTCTGCTGCCGCTCTCCCCCTCCCCCTCCCCCTCCTCCCCCTCCGTCCGACGGAATCCTCCTCCCCCGCATCATCTTCGTCGCCGACGACGACGACCATGACGACTCCATCGCCCTCGGCCTCTCCCCCGATGTCATCAACTCCTACCCCAGCTTCCCCTACGCCAAGGATCATACTCTCGCCTCCGACGCCGCCGATAATGATTTCACTTGCTCCATCTGTCTCTGCGAGTACAAGGACTCCGAGATGCTGAGGATGATGCCGGAGTGCCGCCATTTCTTCCACCTCCTCTGCCTCGATGCATGGCTCAAGCTCAACGGTTCCTGCCCGGTTTGCCGAAACTCTCCGCTTCCCACACCGATCTCCACTCCGATCTCGACGCCGTTGCAGGAAGTGGTGCCTCTCTCTCAGTACGCGGCCGATCGGAGGCCAACCAGTTGA 555 0.627 MSSSAAAASFLSNVGLGYSIAIALAFLLLLSTLLLSSYLCCRSPPPPPPPPPPSDGILLPRIIFVADDDDHDDSIALGLSPDVINSYPSFPYAKDHTLASDAADNDFTCSICLCEYKDSEMLRMMPECRHFFHLLCLDAWLKLNGSCPVCRNSPLPTPISTPISTPLQEVVPLSQYAADRRPTS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0260 184 PANTHER RING-H2 FINGER PROTEIN ATL67 3 181 IPR044289 GO:0016567|GO:0016740
Prci13g0260 184 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Prci13g0260 184 SUPERFAMILY RING/U-box 101 156 - -
Prci13g0260 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 155 IPR013083 -
Prci13g0260 184 SMART ring_2 109 150 IPR001841 -
Prci13g0260 184 Pfam Ring finger domain 108 151 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0260 Prci-Chr13 1743982 1744890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0260 7 182 C3H Transcription Factor Family AT5G06490 36.788 4.36e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0260 - - pvy:116141324 201.445