Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0259 ATGTCGAAGCCGGAATCCTCTATCCTCGCCGCCGATGACGACTGGGCTGATGACGGCGGCGCCACTTTCATCAGCGACCTCAGCATCGGCTCCTTATTCACCAAGTCACTCCTTATCCTCCTCTTTGTCTTCTTCGTCATCCGCCTGTCTATCACCATTTACCGCCACTGCCGCCGCGACAGCCATCAACCCCGTGGCTACGCCGGCAACAATGTCCCCGGCTCAGCTGTTAATAATCCCGACGACCACCACGACGAAGAGAACCCCGTCCAAAATGATGAGGAGGCAACCACAAGTAGGGCCTTCGACGTTGAAGTCGTCATCAGCTTGTGCCCGAATTTCATGTACGGTGATGAAAAAGCCGACGACCGCAACAATACGACATGTCCGATTTGCATGTGCGAGTATTTGGAATCGGATATGATGAGGATGTTGCCGCAATGTGGGCATTACTTTCACCTTAAATGCATTGACGAGTGGCTGAGAATTAGTTGGTCGTGTCCTGTGTGTCGTGACTCGCCGTTGTTGCCACAGGCCACGCCGTCGACATCGTCATCCGGCGATCAATAA 570 0.5368 MSKPESSILAADDDWADDGGATFISDLSIGSLFTKSLLILLFVFFVIRLSITIYRHCRRDSHQPRGYAGNNVPGSAVNNPDDHHDEENPVQNDEEATTSRAFDVEVVISLCPNFMYGDEKADDRNNTTCPICMCEYLESDMMRMLPQCGHYFHLKCIDEWLRISWSCPVCRDSPLLPQATPSTSSSGDQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0259 189 Pfam Ring finger domain 128 171 IPR001841 -
Prci13g0259 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 175 IPR013083 -
Prci13g0259 189 PANTHER RING-H2 FINGER PROTEIN ATL67 29 183 IPR044289 GO:0016567|GO:0016740
Prci13g0259 189 MobiDBLite consensus disorder prediction 79 93 - -
Prci13g0259 189 ProSiteProfiles Zinc finger RING-type profile. 129 171 IPR001841 -
Prci13g0259 189 MobiDBLite consensus disorder prediction 64 96 - -
Prci13g0259 189 SUPERFAMILY RING/U-box 120 177 - -
Prci13g0259 189 SMART ring_2 129 170 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0259 Prci-Chr13 1737957 1738526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0259 107 174 C3H Transcription Factor Family AT5G07040 46.377 5.66e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0259 - - pcin:129290900 387.882