Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0254 ATGGAAAACCACCTCCTGCAGGTGGACCCACCAAACCCTCGACTTCAGAACCCTGCCTTCATCTTCCCGGCCTCACCGGCATCGTCGGTGCTGGAAAAGCCGATGGACCCACAAGGGCTACTGATGGACATTGAGTGGGCTAACATTTTCTCAGGGCAAAACAACTTGCAGGTTGGGGTTGAGGACGCCATCAAGCCAATGGTGGAAGGTGCTGCTGCTTTATCTTCCTCGAGTTTAATGGGTGAAATGAATGGACGTCGTGAGGACATGGAAAAGGAAAGCAGTAATAAAGAGAGAAGGAGAGAAGGGGGAGGGAGGATGAAGAAAACGACGAGGCCGAGATTTGCGTTTCAGACGAGAAGTGCTGATGATATTCTCGACGACGGTTACCGTTGGAGGAAGTATGGCCAGAAAGCTGTCAAGAATAGCATATATCCCAGGAGCTACTACAGATGCACGCATCACACATGCAACGTGAAGAAACAAGTGCAGAGGCTGTCGAAGGACACGGGCATAGTGGTGACAACGTACGAGGGAATTCACAACCACCCTTGTGAGAAGCTCATGGAAACCCTCACTCCTCTTCTCAAGCAAATCCAGTTCCTCACCAGATTCTAG 618 0.5065 MENHLLQVDPPNPRLQNPAFIFPASPASSVLEKPMDPQGLLMDIEWANIFSGQNNLQVGVEDAIKPMVEGAAALSSSSLMGEMNGRREDMEKESSNKERRREGGGRMKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTCNVKKQVQRLSKDTGIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLTRF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0254 205 Gene3D WRKY domain 111 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci13g0254 205 ProSiteProfiles WRKY domain profile. 121 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g0254 205 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 187 IPR044810 GO:0003700
Prci13g0254 205 Pfam WRKY DNA -binding domain 127 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g0254 205 MobiDBLite consensus disorder prediction 75 110 - -
Prci13g0254 205 Coils Coil 80 100 - -
Prci13g0254 205 SMART WRKY_cls 126 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci13g0254 205 FunFam WRKY transcription factor 57 112 186 - -
Prci13g0254 205 MobiDBLite consensus disorder prediction 84 109 - -
Prci13g0254 205 SUPERFAMILY WRKY DNA-binding domain 119 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0254 Prci-Chr13 1717632 1720725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0254 113 205 WRKY Transcription Factor Family AT5G41570 78.495 4.78e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci13g0254 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0254 - - gmx:100796481 234.958