Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci13g0254 | ATGGAAAACCACCTCCTGCAGGTGGACCCACCAAACCCTCGACTTCAGAACCCTGCCTTCATCTTCCCGGCCTCACCGGCATCGTCGGTGCTGGAAAAGCCGATGGACCCACAAGGGCTACTGATGGACATTGAGTGGGCTAACATTTTCTCAGGGCAAAACAACTTGCAGGTTGGGGTTGAGGACGCCATCAAGCCAATGGTGGAAGGTGCTGCTGCTTTATCTTCCTCGAGTTTAATGGGTGAAATGAATGGACGTCGTGAGGACATGGAAAAGGAAAGCAGTAATAAAGAGAGAAGGAGAGAAGGGGGAGGGAGGATGAAGAAAACGACGAGGCCGAGATTTGCGTTTCAGACGAGAAGTGCTGATGATATTCTCGACGACGGTTACCGTTGGAGGAAGTATGGCCAGAAAGCTGTCAAGAATAGCATATATCCCAGGAGCTACTACAGATGCACGCATCACACATGCAACGTGAAGAAACAAGTGCAGAGGCTGTCGAAGGACACGGGCATAGTGGTGACAACGTACGAGGGAATTCACAACCACCCTTGTGAGAAGCTCATGGAAACCCTCACTCCTCTTCTCAAGCAAATCCAGTTCCTCACCAGATTCTAG | 618 | 0.5065 | MENHLLQVDPPNPRLQNPAFIFPASPASSVLEKPMDPQGLLMDIEWANIFSGQNNLQVGVEDAIKPMVEGAAALSSSSLMGEMNGRREDMEKESSNKERRREGGGRMKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNSIYPRSYYRCTHHTCNVKKQVQRLSKDTGIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLTRF | 205 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci13g0254 | 205 | Gene3D | WRKY domain | 111 | 185 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci13g0254 | 205 | ProSiteProfiles | WRKY domain profile. | 121 | 186 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci13g0254 | 205 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 87 | 187 | IPR044810 | GO:0003700 | |
Prci13g0254 | 205 | Pfam | WRKY DNA -binding domain | 127 | 184 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci13g0254 | 205 | MobiDBLite | consensus disorder prediction | 75 | 110 | - | - | |
Prci13g0254 | 205 | Coils | Coil | 80 | 100 | - | - | |
Prci13g0254 | 205 | SMART | WRKY_cls | 126 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci13g0254 | 205 | FunFam | WRKY transcription factor 57 | 112 | 186 | - | - | |
Prci13g0254 | 205 | MobiDBLite | consensus disorder prediction | 84 | 109 | - | - | |
Prci13g0254 | 205 | SUPERFAMILY | WRKY DNA-binding domain | 119 | 185 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci13g0254 | Prci-Chr13 | 1717632 | 1720725 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci13g0254 | 113 | 205 | WRKY Transcription Factor Family | AT5G41570 | 78.495 | 4.78e-55 | 171 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Prci13g0254 | WRKY | 1.4e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci13g0254 | - | - | gmx:100796481 | 234.958 |