Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0238 ATGGGCGATTGTGATGGAGGTGACTTTGCTGGAACCATTTGCTCAATCTGCTACGAAGTTCTCAAGCCCATTGTCGAAGACCTCCAATCCATCAATATCTGCGGCCATGTCTTCCACGAGCTCTGCTTGCAGCAATGGTTCGAGTACTGTTCAACGGCAAAGAAATGCACTTGTCCTGTGTGCAAGCAGAGTTGTCGAGCGAGCGATGTTGCTCGGTTGTATTTCCAGTCTCTCGGAGACGCGAAGGATGCTGTTCTTCCTGAGAAACCCTTAATGCCTGAGGAGGAAGATGCGGGGGTTTTGCGTAGAGAAGTGAAAGTGTTGGAATTGAAAGTTTCGGGGCTCAGCTCAAAATTGGAGCAGCAGGGGAAGAAATTGGGAGATGTAACTAATGAGCTTTATGCTTGCAAGGAGCGGGCAAAATTAGATGCAGAACTAAAAAATGAAGCATTGAAACAAAGAGCGTTTGTACAAGACCAGCTTCTTATGAAATCGGAGGAGCTTGAAAAGTCAACTGTGGAGTGCTCGAGATTACAGGATAGAAACATGGCACTGGCTAAAGAACTTGCAGCATTCAAATTAGTAATAGATCCGAACCTTGATGAAGATGAGGTTTTGAAGCTTGCCACTTTGGGTAATGGTGCCAACAGTAAAGATACGATCGACACGTTACGGAGATCTTTGGTCATGCGAAACAGGAGTTACAAAGAATTAATGACCAAGTGCAATATTCTGGGAAGAGGGGAGGCACGTTATAGTAGAAAGCTTGAGAAGTCTAAAGAGAAAATCAAGAAACTGAAGGAAAGGATACAAGAACTGGAAACAGCAGCTGAAGTGAAAGAGAATGAAATCCTGAGGTCTCTGAAAGTTTCAAAGAAAACAGGTTGCTTCAAGAATCTTGAAAGCAATAACAGCTATAATTCTGATCTATTGTCAGCAGATAAATTTCCATCAAAAGAACAATGGAAGCAAGTTTTGACACCTCATTCCAGGACAGATCTCCCTGTGAACAACAATAATAAAGTGTTGCGATCTGCAAAGATAGAGAACATTGATGGTAAGGAAAGTAGAGAAAATAACGATGTGAATTTCAGCAAAGAAAGTTCAACTGGGATGTGTCTTAATGGAGAGGAAAATTGCATCTCACTTGATGAAGACGATTCAGAATTTACCAAAGGTTTGCCAGGATTTGCAAAATACAACTGTGAAGGCCAAGACAGTGATACTGTTGCCATTAGTAAGCCCACTCTAGCAGAGCCAGAGGCAGCTTCTAGTGTAGAGAGAGAAACAGCAATGCAAGGGGAATACGACCTGGCGGAGCCTTTAAGAGTTGACATTAACAATGAGTTGGGTAGGAATTCTGCCAATACTATGTCTGAAGATGTGACATTACTAGACAATGTGAAACAAGTTCAGACCATTATTAATATTCGAAAAGAAAATCTATCCCCACTGCCACTTTCCATTCCAGGAGATATTTGTTTTTCTGGCAGCTTACTTGGTCCTGATGGAGCTAATCGATACTTGGGGAAATGGTGCAAGCGTGGACAGAAAAAGGAAACAGTCACTCCAAAAGCTTCAATCAATGGCGATTTGATAGCTGTAGGGGCAGATGGTAGAGGTGGTAAAGTTAAAGTTCTGAGATCTCCAAACCAAACCTTCCAGGATCGTAAGGATAATTCAGTAGGTTCAAAAAGGTTGAAATTCGCACCTAAAGCAAACAGCATGCAGTCCCAGGGGTGCCTGCAGATAGAACACTTCTTTGGCAGAGTCAGTCACTAA 1782 0.4259 MGDCDGGDFAGTICSICYEVLKPIVEDLQSINICGHVFHELCLQQWFEYCSTAKKCTCPVCKQSCRASDVARLYFQSLGDAKDAVLPEKPLMPEEEDAGVLRREVKVLELKVSGLSSKLEQQGKKLGDVTNELYACKERAKLDAELKNEALKQRAFVQDQLLMKSEELEKSTVECSRLQDRNMALAKELAAFKLVIDPNLDEDEVLKLATLGNGANSKDTIDTLRRSLVMRNRSYKELMTKCNILGRGEARYSRKLEKSKEKIKKLKERIQELETAAEVKENEILRSLKVSKKTGCFKNLESNNSYNSDLLSADKFPSKEQWKQVLTPHSRTDLPVNNNNKVLRSAKIENIDGKESRENNDVNFSKESSTGMCLNGEENCISLDEDDSEFTKGLPGFAKYNCEGQDSDTVAISKPTLAEPEAASSVERETAMQGEYDLAEPLRVDINNELGRNSANTMSEDVTLLDNVKQVQTIINIRKENLSPLPLSIPGDICFSGSLLGPDGANRYLGKWCKRGQKKETVTPKASINGDLIAVGADGRGGKVKVLRSPNQTFQDRKDNSVGSKRLKFAPKANSMQSQGCLQIEHFFGRVSH 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0238 593 Coils Coil 249 283 - -
Prci13g0238 593 Coils Coil 168 188 - -
Prci13g0238 593 Pfam Ring finger domain 13 62 IPR001841 -
Prci13g0238 593 Coils Coil 134 154 - -
Prci13g0238 593 ProSiteProfiles Zinc finger RING-type profile. 14 62 IPR001841 -
Prci13g0238 593 SUPERFAMILY RING/U-box 13 66 - -
Prci13g0238 593 CDD RING-H2 14 62 - -
Prci13g0238 593 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 125 IPR013083 -
Prci13g0238 593 PANTHER RING ZINC FINGER PROTEIN-RELATED 6 591 - -
Prci13g0238 593 SMART ring_2 14 61 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0238 445 593 C3H Transcription Factor Family AT4G01270 36.129 1.36e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0238 K11985 - gmx:100812811 676.396