Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0231 ATGAATACGGGCCTTCCCGGTCTCAATCGCCCTGTGCCGCCCCCGACGGCGACTTCGGCCGTTGCCTATACGCCGCCGTATGCGGATGATCCGAATAAGAAGATCCGAAAACCGTATACTATTACTAAGTCCAGAGAGAACTGGTCCGAGCAGGAGCACGACAAATTTCTCGAAGCTCTCCAATTATTTGATCGTGATTGGAAGAAGATTGAAGCATTTGTTGGGTCAAAAACTGTTATCCAGATAAGAAGTCATGCGCAGAAGTATTTTCTAAAAGTTCAGAAGAATGGCACTAGTGAACATGTGCCTCCTCCCCGACCAAAGAGAAAAGCTGCTCATCCTTATCCACAAAAGGCCCCTAAAAATGCTGCATTGGCATCTCAAGGTATCGGACCAATGCAATCATCATCTGCTTTTGCTGAGCCTGCATGCATTTATAGACCAGATTCATCATCCGTGCTCGGAACACCAGTTACCAATGTGCCTTTGTCATCTTTGAACTGCAATGCTATGCCGCCTGTCAGCATGCCACAAGTGGCTAAAGATGATATGGGATTGGCTGGACAAGCTGTTCCTCGTAATTGTTGCTATAGCAGTAGTAATGAGAGCACTCCTGGTGTTTGGCCCGATAATAGAAGTATAGATCAAGCAGACCAAGGCAAGCCAGTAACTGTAATGCCAGATTTTGCACGAATCTATAAGTTCATCGGTAGTGTGTTTGATCCAAATGCAACGGATCATCTGCAGAGACTGAAAAAGATGGACCCAATAAATGTGGAAATAGTATTGCTGTTGATGAGAAACCTCACCATCAATTTAACGAGTCCTAAGTTTAAGGACCATCAGAAGTTGCTTTCGTTGTATGATGTGGATGTCGGGAAGTTGAAGACTGGTAGTCTTCGCAGCAATCCCATGTCCAACAAATCTGAAAGTACTGTTCTGTCTGCTTAG 951 0.4511 MNTGLPGLNRPVPPPTATSAVAYTPPYADDPNKKIRKPYTITKSRENWSEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKNAALASQGIGPMQSSSAFAEPACIYRPDSSSVLGTPVTNVPLSSLNCNAMPPVSMPQVAKDDMGLAGQAVPRNCCYSSSNESTPGVWPDNRSIDQADQGKPVTVMPDFARIYKFIGSVFDPNATDHLQRLKKMDPINVEIVLLLMRNLTINLTSPKFKDHQKLLSLYDVDVGKLKTGSLRSNPMSNKSESTVLSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0231 316 Pfam Myb-like DNA-binding domain 45 90 IPR001005 -
Prci13g0231 316 ProSiteProfiles SANT domain profile. 43 96 IPR017884 -
Prci13g0231 316 SMART sant 44 92 IPR001005 -
Prci13g0231 316 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 92 IPR006447 GO:0003677
Prci13g0231 316 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Prci13g0231 316 ProSiteProfiles Myb-like domain profile. 40 90 IPR001005 -
Prci13g0231 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 94 IPR017930 -
Prci13g0231 316 FunFam protein REVEILLE 6 isoform X1 47 95 - -
Prci13g0231 316 CDD SANT 47 90 IPR001005 -
Prci13g0231 316 MobiDBLite consensus disorder prediction 1 36 - -
Prci13g0231 316 Gene3D - 47 95 - -
Prci13g0231 316 PANTHER SWI/SNF COMPLEX-RELATED 28 274 - -
Prci13g0231 316 MobiDBLite consensus disorder prediction 94 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0231 Prci-Chr13 1519089 1523414 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci13g0231 Myb_DNA-binding 7.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0231 - - gmx:778090 433.721