Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0225 ATGTTAGTATACGACGCCGCTTTTCTCGATAAAGAGCTCTCCAAACGCACGTCAATCTTTGGCCTCCCTCTCTGGGTCGTTGTCGGAATCATCGTTGGCGCCGTCATCGTCCTCGCTCTCTTCCTCCTCTCCCTCTGCCTAACCTCTCGCCGCCAACGGCGCTGCCACAATCCAAAAAAGATTCACGATCCTGAAGATGCTGGAACCCCTGTTGTATCGAAGGAAATCCAGGAGATCGTCCACCTACCTGGACCCAACCAGCACCACCCGACGCCGCCGCCGGAGATCCATGTTGACATCGGAAAATCACAGCACCGGGTTGTGGTGTTTTCCGATCGGATTTCTAGTGGAGAGAGCAGGGGTACGGCCATGAGTGCTTCTGAAACGACGTCGTCTTTTGGTGGTGGGAGTGTTGGGCCAGAAGTCTCCCATCTGGGGTGGGGGAGATGGTACACTCTGAGAGAGGTCGAAGCTGCGACTAATGGGCTGTGTGAAGAAAACGTGGTTGGTGAAGGAGGCTATGGAATAGTGTACAAAGGAGTACTTGATGATGGTACGCGAGTTGCAGTGAAAAACCTTCTAAATAATAAGGGCCAAGCTGAGAAAGAATTTAAAGTGGAGGTCGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGCTGCTCGGATACTGTGTTGAGGGAGCATACAGGATGCTTGTGTATGAATATGTTGGCAATGGCAATCTAGAACAATGGCTTCATGGGGATGTTGGATCTGTAAGCCCTCTGACATGGGATATCCGAATGAACATCATATTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTCGAACCAAAGGTTGTTCACCGAGATGTAAAGTCTAGCAACATACTCCTAGATCGCCAGTGGAACCCAAAAGTTTCAGATTTTGGGCTTGCTAAGCTCTTGTGTTCTGAGCATAGTTATGTCACAACTCGAGTCATGGGCACATTTGGTTATGTTGCACCAGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATATTTATAGCTTTGGAATACTTATCATGGAGATCATTACTGGGAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAGGTTAATTTAATAGATTGGTTAAAAGCCATGGTTGGAAATCGAAAATCTGAGCAACTAGTTGATCCTAAGCTCCCTGAGATACCGTCTTCGAAAGCTCTCAAACGCGCACTGCTGGTTGCTCTTCGATGTGTTGATCCCGATGCTACCAAGAGGCCTCAAATGGGGCATGTCATCCACATGCTTGAGGCAGATGACCTATTATTCCCGGATCCTCAGGAACGCCGGATCAGGGGAGAGCCTTCGCATTCCAATCGCGATCGTCAAGAGCAGAAGGAACTGAATTTAGATAAAAGAAGTAATGGAGAAGGGATCACTGGTCCAAGTGAAGCAGATGATAGTAGTAGAAGTCATCATCAGCCAACTAGGTGGAGATAA 1494 0.4833 MLVYDAAFLDKELSKRTSIFGLPLWVVVGIIVGAVIVLALFLLSLCLTSRRQRRCHNPKKIHDPEDAGTPVVSKEIQEIVHLPGPNQHHPTPPPEIHVDIGKSQHRVVVFSDRISSGESRGTAMSASETTSSFGGGSVGPEVSHLGWGRWYTLREVEAATNGLCEENVVGEGGYGIVYKGVLDDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVGNGNLEQWLHGDVGSVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSEHSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYGRPQGEVNLIDWLKAMVGNRKSEQLVDPKLPEIPSSKALKRALLVALRCVDPDATKRPQMGHVIHMLEADDLLFPDPQERRIRGEPSHSNRDRQEQKELNLDKRSNGEGITGPSEADDSSRSHHQPTRWR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0225 497 Pfam Protein kinase domain 166 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0225 497 MobiDBLite consensus disorder prediction 442 497 - -
Prci13g0225 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Prci13g0225 497 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Prci13g0225 497 SMART serkin_6 163 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0225 497 PANTHER OS01G0323000 PROTEIN 8 463 - -
Prci13g0225 497 Gene3D Transferase(Phosphotransferase) domain 1 239 441 - -
Prci13g0225 497 FunFam Putative receptor-like serine/threonine-protein kinase 239 450 - -
Prci13g0225 497 SUPERFAMILY Protein kinase-like (PK-like) 142 435 IPR011009 -
Prci13g0225 497 FunFam Probable serine/threonine-protein kinase At1g01540 143 238 - -
Prci13g0225 497 ProSiteProfiles Protein kinase domain profile. 163 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0225 497 CDD STKc_IRAK 169 435 - -
Prci13g0225 497 Gene3D Phosphorylase Kinase; domain 1 145 238 - -
Prci13g0225 497 MobiDBLite consensus disorder prediction 442 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0225 Prci-Chr13 1496973 1500553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0225 26 490 Trihelix Transcription Factor Family AT5G38560 37.263 6.09e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci13g0225 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0225 - - pvy:116134269 736.873