Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0224 ATGTTAGTATACGACGCCGCTTTTCTCGATAAAGAGCTCTCCAAACGCACGTCAATCTTTGGCCTCCCTCTCTGGGTCGTTGTCGGAATCATCGTTGGCGCCGTCATCGTCCTCGCTCTCTTCCTCCTCTCCCTCTGCCTAACCTCTCGCCGCCAACGGCGCTGCCACAATCCAAAAAAGATTCACGATCCTGAAGATGCTGGAACCCCTGTTGTATCGAAGGAAATCCAGGAGATCGTCCACCTACCTGGACCCAACCAGCACCACCCGACGCCGCCGCCGGAGATCCATGTTGACATCGGAAAATCACAGCACCGGGTTGTGGTGTTTTCCGATCGGATTTCTAGTGGAGAGAGCAGGGGTACGGCCATGAGTGCTTCTGAAACGACGTCGTCTTTTGGTGGTGGGAGTGTTGGGCCAGAAGTCTCCCATCTGGGGTGGGGGAGATGGTACACTCTGAGAGAGGTCGAAGCTGCGACTAATGGGCTGTGTGAAGAAAACGTGGTTGGTGAAGGAGGCTATGGAATAGTGTACAAAGGAGTACTTGATGATGGTACGCGAGTTGCAGTGAAAAACCTTCTAAATAATAAGATGCTTGTGTATGAATATGTTGGCAATGGCAATCTAGAACAATGGCTTCATGGGGATGTTGGATCTGTAAGCCCTCTGACATGGGATATCCGAATGAACATCATATTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTCGAACCAAAGGTTGTTCACCGAGATGTAAAGTCTAGCAACATACTCCTAGATCGCCAGTGGAACCCAAAAGTTTCAGATTTTGGGCTTGCTAAGCTCTTGTGTTCTGAGCATAGTTATGTCACAACTCGAGTCATGGGCACATTTGGTTATGTTGCACCAGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATATTTATAGCTTTGGAATACTTATCATGGAGATCATTACTGGGAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAGGTTAATTTAATAGATTGGTTAAAAGCCATGGTTGGAAATCGAAAATCTGAGCAACTAGTTGATCCTAAGCTCCCTGAGATACCGTCTTCGAAAGCTCTCAAACGCGCACTGCTGGTTGCTCTTCGATGTGTTGATCCCGATGCTACCAAGAGGCCTCAAATGGGGCATGTCATCCACATGCTTGAGGCAGATGACCTATTATTCCCGGATCCTCAGGAACGCCGGATCAGGGGAGAGCCTTCGCATTCCAATCGCGATCGTCAAGAGCAGAAGGAACTGAATTTAGATAAAAGAAGTAATGGAGAAGGGATCACTGGTCCAAGTGAAGCAGATGATAGTAGTAGAAGTCATCATCAGCCAACTAGGTGGAGATAA 1389 0.4824 MLVYDAAFLDKELSKRTSIFGLPLWVVVGIIVGAVIVLALFLLSLCLTSRRQRRCHNPKKIHDPEDAGTPVVSKEIQEIVHLPGPNQHHPTPPPEIHVDIGKSQHRVVVFSDRISSGESRGTAMSASETTSSFGGGSVGPEVSHLGWGRWYTLREVEAATNGLCEENVVGEGGYGIVYKGVLDDGTRVAVKNLLNNKMLVYEYVGNGNLEQWLHGDVGSVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSEHSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYGRPQGEVNLIDWLKAMVGNRKSEQLVDPKLPEIPSSKALKRALLVALRCVDPDATKRPQMGHVIHMLEADDLLFPDPQERRIRGEPSHSNRDRQEQKELNLDKRSNGEGITGPSEADDSSRSHHQPTRWR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0224 462 Gene3D Phosphorylase Kinase; domain 1 139 203 - -
Prci13g0224 462 FunFam Putative receptor-like serine/threonine-protein kinase 204 415 - -
Prci13g0224 462 MobiDBLite consensus disorder prediction 407 462 - -
Prci13g0224 462 Gene3D Transferase(Phosphotransferase) domain 1 204 406 - -
Prci13g0224 462 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Prci13g0224 462 SMART serkin_6 163 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0224 462 SUPERFAMILY Protein kinase-like (PK-like) 147 406 IPR011009 -
Prci13g0224 462 Pfam Protein kinase domain 197 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0224 462 ProSiteProfiles Protein kinase domain profile. 94 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0224 462 PANTHER OS01G0323000 PROTEIN 197 428 - -
Prci13g0224 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Prci13g0224 462 MobiDBLite consensus disorder prediction 407 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0224 Prci-Chr13 1496973 1500553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0224 135 400 Receptor kinase-like Gene Family AT4G02010 41.311 1.31e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci13g0224 Pkinase 6.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0224 - - pvy:116134269 649.818