Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0209 ATGGGCTTTCCGGTCGGATACACCGACGTCGTTTTACCTAATCTCTTCCTCCACACACTCTCGCTCCTTGGATTCATCCGCAACCTCATCTTCCTGCTCTTCCACTACCTCGGCCTCTCCGATTTCCTCGAAACCGAGGTCGTCTGGTCCGAATCTCACGCTCGACTGCCCGACAGCCCCCCGGTGTCCGCGCTTCTGATCCGCGAGATCCTCCCCGTCGTCAAGTTCGGCGACCTCCTCGTCGCCAACGCCGCCGCCGACACGCCGGAGAGCTGCGCCGTCTGCCTGTATGAGTTCGAGCGGGAGGAGGAAATCAGGTGCTTGACGAATTGCAAGCACATTTTTCACCGGGCTTGTCTGGACCGTTGGATGGATCACGATCAGAAGACCTGTCCCTTGTGCAGGACCCCCTTCGTGCCCGATGATATGCAGGATGATTTCAATCAACGGCTCTGGGCTGCTTCTGGAGTTTCTGATGTCTACGGAGACTACACTTCCCTGTGA 504 0.5774 MGFPVGYTDVVLPNLFLHTLSLLGFIRNLIFLLFHYLGLSDFLETEVVWSESHARLPDSPPVSALLIREILPVVKFGDLLVANAAADTPESCAVCLYEFEREEEIRCLTNCKHIFHRACLDRWMDHDQKTCPLCRTPFVPDDMQDDFNQRLWAASGVSDVYGDYTSL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0209 167 Pfam Ring finger domain 91 135 IPR001841 -
Prci13g0209 167 FunFam RING-H2 finger protein ATL73 67 142 - -
Prci13g0209 167 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 155 - -
Prci13g0209 167 SMART ring_2 92 134 IPR001841 -
Prci13g0209 167 SUPERFAMILY RING/U-box 91 141 - -
Prci13g0209 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 140 IPR013083 -
Prci13g0209 167 ProSiteProfiles Zinc finger RING-type profile. 92 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0209 Prci-Chr13 1362688 1363469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0209 1 166 C3H Transcription Factor Family AT1G63840 52.273 3.65e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0209 K16281 - qsa:O6P43_017655 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0209 13 1362688 1363469 Prci13g0209 13 1362688 1363469 ECH