Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0205 ATGAAAAGTCCAATTTCCCATTCTCGTCGCCGGAGCTCCGGCTCCGGCTACCGCACGCCAGACCACCGCCACGGCTACTCCTCCAGCTATGATTCCTCCGGGGTTGGTACCACCATCGTCAGGTCAAACGCCTCCCGGAACCCTGTCGCGGCTGCCGCCAGATCAGTGGCTGCCGTTTTTGTTGCTTGCTTCACCCCGCCAGACGAGAGTAACTCCAAGAGCTTCGTCGATGACCGGGAGTTCAAAGCTTCCTCCTCCTCCTCCTCCGTTGTATCCAATTATTCGCACGGTTCAAATGGACGAATCAGTTCCAGTTCATACAAGTCAACTCAGAGAAAAGAGCCTAGATCTCTGAATTTCACCATGGAGGATATCTTGCAAGCCACAAGAAACTTCTCCGCTGCTTACAAGGTCGGCCAAGGTGGTTTTGGTACAGTGTACATGGCAAATCTCCGGGATGGAAATGTTGTTGCAGTAAAGCGTGCCAAGAAGAGTTTATATGAGAAACATTTGGGTTTTGAGTTCCAAAGTGAGATCCAAACATTATCACGGGTTGAACATTTGAATTTGGTGAAGTTCTATGGATATTTGGAGCAAGGAGGTGAAAGAATTATCGTTGTGGAGTACGTCCCAAATGGAACCCTTAGAGAACATTTAGATTGCATTCGCGGGAGCATTTTGGACCTTGCTTCTCGACTAGACATTGCGATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATTATTCATAGAGACATCAAATCTTCCAACATCCTTCTTACTGAAAATTTGCGAGCTAAGGTAGCTGATTTTGGTTTTGCTAGACAGGCCCCTGACAGTGATTCTGGTGTGACCCATGTATCCACCCAAGTTAGAGGAACTGCTGGCTACTTGGATCCTGAATACCTCAGAACCTATCAACTAACTGAGAAGAGTGACGTTTATTCATTTGGCGTCTTACTTGTTGAACTTGTCTCAGGTAGACGTCCCATTGAACCAAAATTTGAACTGAAGGAGAGAATCACGGCAAAATGGGCTATGAAGAAATTTGTTGAGGGTGATGCCATATCGGTCTTGGACCCAAAACTAGATCACACTGCTGCAAATAACCTGGCACTTGAGAAGATACTTGAACTAGCCTTGCAGTGTTTGGCGCCTCGTAGACAAAGCAGACCTAGTATGAAGAGATGTGCCGAGATCCTTTGGACCATCCGCAAGGATTACAGGGAGCTATCAACTTCAGATTTTTGTTCATTTTCCTCTACTTCCCAGAGGAGCGCGTCAATAAAAGAGTGA 1314 0.4635 MKSPISHSRRRSSGSGYRTPDHRHGYSSSYDSSGVGTTIVRSNASRNPVAAAARSVAAVFVACFTPPDESNSKSFVDDREFKASSSSSSVVSNYSHGSNGRISSSSYKSTQRKEPRSLNFTMEDILQATRNFSAAYKVGQGGFGTVYMANLRDGNVVAVKRAKKSLYEKHLGFEFQSEIQTLSRVEHLNLVKFYGYLEQGGERIIVVEYVPNGTLREHLDCIRGSILDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILLTENLRAKVADFGFARQAPDSDSGVTHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVSGRRPIEPKFELKERITAKWAMKKFVEGDAISVLDPKLDHTAANNLALEKILELALQCLAPRRQSRPSMKRCAEILWTIRKDYRELSTSDFCSFSSTSQRSASIKE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0205 437 SUPERFAMILY Protein kinase-like (PK-like) 110 410 IPR011009 -
Prci13g0205 437 Pfam Protein kinase domain 136 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0205 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Prci13g0205 437 Gene3D Phosphorylase Kinase; domain 1 92 209 - -
Prci13g0205 437 Gene3D Transferase(Phosphotransferase) domain 1 210 429 - -
Prci13g0205 437 ProSiteProfiles Protein kinase domain profile. 132 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0205 437 PANTHER OS01G0750732 PROTEIN 35 428 - -
Prci13g0205 437 SMART serkin_6 132 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0205 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 210 421 - -
Prci13g0205 437 MobiDBLite consensus disorder prediction 87 115 - -
Prci13g0205 437 MobiDBLite consensus disorder prediction 1 34 - -
Prci13g0205 437 ProSitePatterns Protein kinases ATP-binding region signature. 138 164 IPR017441 GO:0005524
Prci13g0205 437 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 89 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0205 Prci-Chr13 1299442 1302747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0205 120 400 Receptor kinase-like Gene Family AT1G79620 45.614 1.79e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Prci13g0205 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0205 - - qsa:O6P43_027253 601.668