Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0202 ATGTCGCTTCTGGCCTCTTCCCTCACTTTCTTCTTCCTCTCCCTCCTCGCTTTTCCCTCTTCTCTAGCCAATCGTCTTGTGTTGAGAGGACACGATACCCTGCCGAGTCAGAACCGGACGTTCGAGCTTGGCTTCTTCACCTTCAATGGCGGACAATCCAATCATTATTACTTGGCTGTTCGGTACGCGTCGGTTCCGCTTCCCACCTACGTCTGGGTCGCCAATCGCGAAAAGCCCAGCAAAAATCTCGCCGATTCGACGCTGGAAATCACCGAAACTGGCCTCCTGCTTGTGAAAGATTCACCAACCTCGATTCTTTGGCAGAGTACGAATTTAGAAACTTCGGGAGCAGCACAATTGAAGCTTTTAGACAGTGGGAATTTGATTCTGGTCACTCATGAAGGCTCTGTCTCCTGGCAGAGCTTCGATTTCCCCACGGACGCCTGGCTTCCGGGTATGAATCTGACCCGGACCCGATCCTTGGTGTCATGGCGGAGCCCCACGGACCCGTCGCCGGGACTCTATTCTCTGCGGCTGAGACCGCCGGGCTACGGTGAGTTCGAGCTCCTTTTCAATAACTCTAGATCTTATTGGACCACCGGACGGTGGACCGGCGACTCGTTCCTCAACATTCCGGAGATGATGATTCCTTACCTTTACCTCTTCCACTTCGTGAATCCATTCACACCGACGGCATCGTTTGGGTTCCGGGAGAAGCCTCTAAACGGGCTGAGCCCACCCACGTATTTCCGGGTTGAACCGTACGGGCAGGTCCGGCAGTACACGTGGTGGTCTCAGGCTGGAAGCTGGAACATTTTCTGGTCGGGGCCGAAAAATGTGTGTGACGTTCATGGCCTGTGTGGCAGCTTAGGAGTCTGCCAAGGAGAAACGACGCCGAAGTGCGAGTGCGTCTCCGGTTTCAAGCCCTTAGACGACGGTAGATGGGCTTCCGGGGACTACTCCGGCGGGTGCCGTCAGAAAACGGATAGTCTCTGCGATAAAAGTGATGGGTTCGTAGATATGGGCGTTATGAGCTTCGAAGCACCCAATGCGCGGTCGTCTCAAAGCAAGTCTCGAAGCAATTGCGAGACTACTTGTTTAAGTTCATGCGATTGTATTGGCTTGTCCTTCGACCAGAGGACCAGTTCCTGCAAGAACTTCTACGGGTCAATTCTGAATCTCCATAATTCATCTTCTGGAACCTCTGTTGATGGCAATTTGTATGTCAGGGTACAACGAGAACAATCTGGTAAGAAGTCGAGTCGTCAAATTCTTACTGGTACTATTATCGGGGCAATTGCCTTTCTCGGGTTAATAGTGGCGACATTGTTGGTATTGCTGAATCGAAGGCAGAAGAAGAAACTACAAGAAGATGGATTCATTCATGCACTGAATCTTCAATTATTTTCCTACAAAGAGCTTCAATTAGCGACCCGGGGATTCTCAGAGAAGGTGGGTCATGGTGGGTTCGGGACAGTATTTCAAGGAGAATTGCCAGATTCAACTCTCGTTGCAGTGAAGCGGCTGGAGAGACCAGGTAGTGGAGAAAAGGAGTTCAGAGCAGAAGTTTCCACCATTGGTAATATCCAACATGTTAATCTCGTTAGACTCAGAGGCTTCTGCTCAGAAAATTCTCACAGACTTCTGGTTTACGAGTTAATGCCCAACGGTGCTCTTAGTTCTTACCTTCGCAAAGAAGGAGGGCCTAGTCTGAGTTGGGAGGTCAGGTTCCGAATAGCTGTAGGAACGGCCAAAGGTATAGCTTATTTACACGAAGAATGTCGCGATTGTATCATTCACTGTGATATCAAACCTGAAAACATTCTCTTGGACGCCAGTTTCACGGCCAAAGTTTCTGACTTTGGGTTGGCGAAGCTCATGGGGAGGGATTTCAGCAGGGTTTTAGCAACCATGAGAGGCACTTGGGGCTATGTAGCACCAGAGTGGATCTCTGGAGTTGCAATCACTACAAAAGCCGATGTTTACAGCTACGGGATGACATTGTTAGAGCTTATAAGTGGTCGCCGTAATGTGGAGGCACCACCACAATCAGCAGGCGACGGCGGCTGCTGCGAGGAGGCTGGGGAGAAAGAGAAGTGGTTCTTCCCTCCGTGGGCTGCGCGGCAGATAATTGAAGGGAATTGGACTGCTATAGTTGATAAGAGGCTTGGCAATGCATGTAACATGGAGGAGGTAAGGAGGGTGGCTATGGTAGCTGTGTGGTGCATTCAGGATGATGAAGGAAGTAGGCCTTCAATGGGCATGGTGGTGAAGATGTTGGAGGGGTTAGTGGAAGTGAGTGTCCCTCCAACGCCTAAATTGCTTCAAGCACTGGTCTCCGGCGAGTCCTTTCGAGGTGTCAAGGCAGATTCCAGCACAGGCGACAGCCTCTCAGGTGCCAATGCTGATTCAGAATCGTTCACAGGGGCCGTTTCTTCCGCAGCAAATATGAATGTCAATGTTGTTGTACGATGA 2475 0.5063 MSLLASSLTFFFLSLLAFPSSLANRLVLRGHDTLPSQNRTFELGFFTFNGGQSNHYYLAVRYASVPLPTYVWVANREKPSKNLADSTLEITETGLLLVKDSPTSILWQSTNLETSGAAQLKLLDSGNLILVTHEGSVSWQSFDFPTDAWLPGMNLTRTRSLVSWRSPTDPSPGLYSLRLRPPGYGEFELLFNNSRSYWTTGRWTGDSFLNIPEMMIPYLYLFHFVNPFTPTASFGFREKPLNGLSPPTYFRVEPYGQVRQYTWWSQAGSWNIFWSGPKNVCDVHGLCGSLGVCQGETTPKCECVSGFKPLDDGRWASGDYSGGCRQKTDSLCDKSDGFVDMGVMSFEAPNARSSQSKSRSNCETTCLSSCDCIGLSFDQRTSSCKNFYGSILNLHNSSSGTSVDGNLYVRVQREQSGKKSSRQILTGTIIGAIAFLGLIVATLLVLLNRRQKKKLQEDGFIHALNLQLFSYKELQLATRGFSEKVGHGGFGTVFQGELPDSTLVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYELMPNGALSSYLRKEGGPSLSWEVRFRIAVGTAKGIAYLHEECRDCIIHCDIKPENILLDASFTAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELISGRRNVEAPPQSAGDGGCCEEAGEKEKWFFPPWAARQIIEGNWTAIVDKRLGNACNMEEVRRVAMVAVWCIQDDEGSRPSMGMVVKMLEGLVEVSVPPTPKLLQALVSGESFRGVKADSSTGDSLSGANADSESFTGAVSSAANMNVNVVVR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0202 824 ProSiteProfiles PAN/Apple domain profile. 332 412 IPR003609 -
Prci13g0202 824 ProSiteProfiles Protein kinase domain profile. 479 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0202 824 FunFam S-receptor-like kinase 5 554 769 - -
Prci13g0202 824 FunFam Receptor-like protein kinase 4 443 553 - -
Prci13g0202 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 203 IPR036426 -
Prci13g0202 824 CDD B_lectin 25 145 IPR001480 -
Prci13g0202 824 Pfam S-locus glycoprotein domain 198 309 IPR000858 GO:0048544
Prci13g0202 824 SUPERFAMILY Protein kinase-like (PK-like) 463 761 IPR011009 -
Prci13g0202 824 Gene3D - 17 142 IPR036426 -
Prci13g0202 824 SMART serkin_6 479 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0202 824 CDD STKc_IRAK 485 763 - -
Prci13g0202 824 CDD PAN_AP_plant 328 411 - -
Prci13g0202 824 Gene3D Transferase(Phosphotransferase) domain 1 554 768 - -
Prci13g0202 824 Pfam D-mannose binding lectin 69 159 IPR001480 -
Prci13g0202 824 PIRSF SRK 1 819 IPR024171 GO:0004674
Prci13g0202 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Prci13g0202 824 ProSitePatterns Protein kinases ATP-binding region signature. 485 507 IPR017441 GO:0005524
Prci13g0202 824 ProSiteProfiles Bulb-type lectin domain profile. 19 143 IPR001480 -
Prci13g0202 824 SMART blect_4 25 145 IPR001480 -
Prci13g0202 824 Gene3D Phosphorylase Kinase; domain 1 443 553 - -
Prci13g0202 824 Pfam Protein kinase domain 482 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0202 824 PANTHER OS07G0415500 PROTEIN 6 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0202 Prci-Chr13 1261222 1264160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0202 469 770 Receptor kinase-like Gene Family AT5G20050 45.223 2.60e-77 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci13g0202 Pkinase 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0202 - - lja:Lj0g3v0252549.1 1072