Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0201 ATGGAGTTGCACGCAGAATTTGAGGGGTCCTTGTCGGATTGTACTGATGAAGAGTTGGGAGATGAGATGTGTCGACGTTCTGAGTTTAAAACTGAATATAAACGCCAGGATGGTGAGGTGTTGTTCGATTCTAAGGGATTGAAGAGCAGTTGTGGAGGGGCCAGAAAAGTTCAGCGTGGGGGATTTATTGATTTGAATATACCAGGGTTTGAGTTGAATGAACTCACAACAACAAGAAGAATTGAGTTGAATGAACTCAGTCCAGGAAATTTGTGCATTACGAGTGAGGCAAACAAAATGCCAGGATTACCGGATGGAGGCAAGAGATGTGCCGATGATGATGATGATGATGATGTTTTGGTATTGGACCCATCTGATGTAAATGAAGGGACCTTTAATCGTAAAAGGAAGAGAGAGTCTCATTCTATGCAGCAGGGAATGCTAAGCTGGTTGACTGGCATTGCGAAGAATCCTTGTGATCCTGTTGTTGATTCAATACCTGAAAAATCGAAGTGGAGGTCTCACAGCAATGAGAAGGTCTGGAAGCAGGTTTTGTTGTTTCGGGAGGCTGTTTTTCTAAAGCGACATGCTGAGTCAAGCAGTGAACAGTTGAATTGGCAGAGACAAAAGATGCATCCATCCATGTATGAAGATCACCTTGAGGCAACGTACAATCTTAGGGAGAGATGGAAATGTGCCAAGAAGCTTTTATTTGAAAGATCTATGTCTGTAAGAGTCTCTTCAGATTCATCCGTGGAAACCAAGGGTAATCTGGAGAGAACTTCTAGTCCTCACAATGAAGATTCTGCTGAGAAAAAGCTGCCTGATTCCTCTGCTGCGCTGTCAGGTCTTGACAAATGTGGCATAGTTCCCATCCCTGTGGGGCCAAGTCATCAAGCTATAGTGCCAGTATGGACTGGCATGACTTCTGAAAGTGATTCCAAATGGTTGGGGACCCGAATATGGCCATTAGAGAAAGTAAATCACAGACTCCTGATTGAGAGGGACCCCATTGGCAAGGGAAGACAAGATTCATGTGGCTGCCAAGTAGCGGGTTCTGTCGAATGTGTCAGATTTCACGTAGCTGAGAAAAGGGCTAAGGTTAAGCTGGAATTAGGTGTGGCTTTTTACCTGTGGAATTTAGACAAGGTAGGTGAAGATGTTAGGCAATCCTGGACTGTGGATGAAGAGAAGAAGTTTAAGGATGTGGTGCGATCGAATCCTCCATCACTGGAGAGATACTATTGGGATCATATTTTTAAATCATTTCCCAAGAAGACCAGGGAAGATCTAGTTAGCTACTATTTCAATGTCTTTCTTTTGCAGCGCCGAGGATATCAGAACAGGAATACTCCAAATGAAATTGATAGTGATGATGAAGAATCAGATTTTGGACCTTTGAGGAATTTTTTTGGACAGCAAGCACAGAAGCCTACCAGCTCCATCTTACTAACCCCCAAAAAGTCTCAGACAAAGAACAAATAG 1485 0.4337 MELHAEFEGSLSDCTDEELGDEMCRRSEFKTEYKRQDGEVLFDSKGLKSSCGGARKVQRGGFIDLNIPGFELNELTTTRRIELNELSPGNLCITSEANKMPGLPDGGKRCADDDDDDDVLVLDPSDVNEGTFNRKRKRESHSMQQGMLSWLTGIAKNPCDPVVDSIPEKSKWRSHSNEKVWKQVLLFREAVFLKRHAESSSEQLNWQRQKMHPSMYEDHLEATYNLRERWKCAKKLLFERSMSVRVSSDSSVETKGNLERTSSPHNEDSAEKKLPDSSAALSGLDKCGIVPIPVGPSHQAIVPVWTGMTSESDSKWLGTRIWPLEKVNHRLLIERDPIGKGRQDSCGCQVAGSVECVRFHVAEKRAKVKLELGVAFYLWNLDKVGEDVRQSWTVDEEKKFKDVVRSNPPSLERYYWDHIFKSFPKKTREDLVSYYFNVFLLQRRGYQNRNTPNEIDSDDEESDFGPLRNFFGQQAQKPTSSILLTPKKSQTKNK 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0201 494 CDD SANT 391 439 IPR001005 -
Prci13g0201 494 SMART sant 388 441 IPR001005 -
Prci13g0201 494 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 126 491 - -
Prci13g0201 494 MobiDBLite consensus disorder prediction 450 494 - -
Prci13g0201 494 MobiDBLite consensus disorder prediction 472 494 - -
Prci13g0201 494 Pfam Myb-like DNA-binding domain 389 438 IPR001005 -
Prci13g0201 494 MobiDBLite consensus disorder prediction 260 274 - -
Prci13g0201 494 MobiDBLite consensus disorder prediction 249 275 - -
Prci13g0201 494 SMART ELM2_2 292 343 IPR000949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0201 Prci-Chr13 1240043 1245744 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci13g0201 Myb_DNA-binding 1.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0201 - - pcin:129291322 996.882