Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci13g0168 | ATGGCTGTGGTGAGTCCTGTGCCTGCAATCCCACGAAGTTTCGGTTCTGTGAGGTTGCCTCAAGATTTTGGGGTCACCAGCAACATGGCTGGGATGGGAGAAATTGTAGAGGAGCCTGAAACAGGTGTGGTTAATGACACTATCTACGTTGCTGTGACAAAAGATTTGAAAGAGAGCAAGTCAAATCTGACATGGGCGATACAAAACTCTGGAGGAAACAAGATTTGCATCCTCCATGTTCATGTGCCTGCAACTATGATCCCCTTGATGGGTACTAAATTTCCGGCCAGTTCACTGAAAGAAGACGAAGTTGAAGCATATAGGGAACTTGAAAGGCAAAACATGCATAAGAGTATAAATGAATATATTCTCTTCTCTTCACGAATGGGGGCCCGGGCAGAGAAGTTGCATATTGAAATGGAATGCGCTGAGAAAGGTATTGTAGAGCTTGCCTTTCAGCATGGCATCCGTGAGCTTGTCATGGGAGCAGCATCTGATAATCGTCATTCTAGGAAAATGATGGACCTCAAATCTAAGAAAGCCATTTATGTGCGGGAACATGCTCCAGCTTATTGTCAAATACGGTTTGTCTGCAAAGGGCGCCTTATACACAATAGAAATCGCTGTTTGGGTGATGGTAATGAAGAGGCTGCATCACCTTTGCCGCAGCATAGGCCAAGCCCTGTGCATTCACTTCACCTGAGATCCCAATCTATTACGTTGGGGCAGAATGATCGGGCAAGACTCATCAATGAAAAGCTTGAGTTACTTCGCAGAGCAAGGTCTGCTATTGCTGGGCAAGAACGCAAAACAGTGATCTTTTCTTCTCCAGACACTGAAGGGTTTTCCAGTCCAAGTAACAGATTGAGTGCAGAAGTTAGTAGTGATGGGTCAGACGGGCTGTTAAGAAAGAGTCCTTCAGTTTTCTCAACATGTTCTGAAAGTGGAACTGCTGAAGTGGCATTGACTCCAAAATTGATTTCTGAGGGGAGTGAGAATGTGATAGACTCAAGTGAATTTTCTCCAGCTATAGCAAGCCTCTGTCGTTCATCTCCTCCTAGCAATGGAGGAATGGATGATACTCTCTACTATCAGCTTGAACAGGCCATGTCTGAAGCTGAGAGTGCAAGGCGGGATGCCTTTCGAGAAACACTTAAGCGTGGGAAGGCTGAAAAAGAAGCAGTTGATGCTATGCGCAGGGCTAAAGCCTCTGAAAGCTTGTACAAAGAGGTACTCAAACAAAGGAAACAAATTGAGGAAGCACTAGCAAAAGAAAGAGAAGAACTTGAAGGGATGAAGAGCCTGAGAGACAAAGTTAAGGAAGAACTTAGACTTGCCCTAGATCAAAAGATGTGTTTGGGGAGTCAAATTGAATCATCTGAATTCATGGTAAGGGAGTTAAAACAAAAGATTATATCTGTTGTGGATCTGTTGACAATATGCAAGAAAGAAAGAGATGAGTTACAGATGCAGCGCAATGATGCATTAAAAGAAGCCGAGGAGTTGAGGAAAATAAAAGAAGACGTTTCAAGCACACATGGGCCTGAGTTGTTTTCAGAGTTCTCTTTTCAAGAGATTGAACAAGCAACGAGGAACTTCAATTCATCCCTAAAGATTGGAGAGGGTGGATATGGAAATATCTATAAAGGTGTCTTGCGTCACACCGAAGTGGCCATAAAAATGCTGCACGCAAACAACTCCTCACAGGGTCCCGCAGAGTTTCAACAGGAGGTTGATGTGTTGAGTAAGTTAAGACATCCGAACCTTATTACACTCATAGGAGCATGCCCAGAATCCTGGACTCTTGTCTACGAGTACCTCCCAAATGGAAGCCTCGAAGACCGGCTCAACTGCAAGGATAACACGGCTCCTCTATCATGGCAAGCTCGAATCCGCATTGCTGCTGAGCTCTGCTCTGCTCTCATCTTCCTTCATTCCTTTAGGCCTCACTGCATAGTGCACGGAGACTTGAAACCCTCAAATGTTCTACTTGATGCAAACTTTGTTAGCAAGCTCGGTGACTTTGGAATTTGCCGCATATTACCCAATATTGAGAGTTCAGGTGATGATACTACAGATTGTTGGAGAACTATTCCAAAGGGCACTCTAGTCTACATGGATCCCGAATTTCTCGCTTCCGGGGAACTCACTCTGAAATCAGATGTTTATTCATTTGGCATCATATTATTAAGATTGTTGACTGGGAGACCAGCCTTGGGAATAACAAAGGAAGTGCAGTACGCATTAGATTCTGGAAAGTTTCAATCCCTCTTGGATTCTTTGGCCGGAGACTGGCCATTTGTGCAGGCTGAACAGTTGGCTCGTGTGGCTCTGAGGTGTTGTGAGTTGAGCCGGAAAAATCGGCCAGATCTCAGGTCAGATGTCTGGAAAATACTGGAAGCGATGAGTGCTTTTTCTGGAGGCACATACTCCTTCAAGCCAGGTTATGAAGGGTCTGACCAGCCTCCTTCATATTTTATTTGTCCAATCTTTCAGGAAGTGATGCTAGATCCGCATATCGCAGCAGATGGTTTTTCTTATGAAGGTGAGGCTATACGAGGATGGTTCGATAGTGGTCACTCCACGTCACCCATGACAAATGCGAGGCTTGAACACCATAATCTTGTCCCGAACCATGCTCTTCGTTCCGCAATTCGGGACTGGCTACAACATCACTGA | 2679 | 0.449 | MAVVSPVPAIPRSFGSVRLPQDFGVTSNMAGMGEIVEEPETGVVNDTIYVAVTKDLKESKSNLTWAIQNSGGNKICILHVHVPATMIPLMGTKFPASSLKEDEVEAYRELERQNMHKSINEYILFSSRMGARAEKLHIEMECAEKGIVELAFQHGIRELVMGAASDNRHSRKMMDLKSKKAIYVREHAPAYCQIRFVCKGRLIHNRNRCLGDGNEEAASPLPQHRPSPVHSLHLRSQSITLGQNDRARLINEKLELLRRARSAIAGQERKTVIFSSPDTEGFSSPSNRLSAEVSSDGSDGLLRKSPSVFSTCSESGTAEVALTPKLISEGSENVIDSSEFSPAIASLCRSSPPSNGGMDDTLYYQLEQAMSEAESARRDAFRETLKRGKAEKEAVDAMRRAKASESLYKEVLKQRKQIEEALAKEREELEGMKSLRDKVKEELRLALDQKMCLGSQIESSEFMVRELKQKIISVVDLLTICKKERDELQMQRNDALKEAEELRKIKEDVSSTHGPELFSEFSFQEIEQATRNFNSSLKIGEGGYGNIYKGVLRHTEVAIKMLHANNSSQGPAEFQQEVDVLSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLNCKDNTAPLSWQARIRIAAELCSALIFLHSFRPHCIVHGDLKPSNVLLDANFVSKLGDFGICRILPNIESSGDDTTDCWRTIPKGTLVYMDPEFLASGELTLKSDVYSFGIILLRLLTGRPALGITKEVQYALDSGKFQSLLDSLAGDWPFVQAEQLARVALRCCELSRKNRPDLRSDVWKILEAMSAFSGGTYSFKPGYEGSDQPPSYFICPIFQEVMLDPHIAADGFSYEGEAIRGWFDSGHSTSPMTNARLEHHNLVPNHALRSAIRDWLQHH | 892 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci13g0168 | 892 | Coils | Coil | 250 | 270 | - | - | |
Prci13g0168 | 892 | Pfam | U-box domain | 823 | 892 | IPR003613 | GO:0004842|GO:0016567 | |
Prci13g0168 | 892 | Coils | Coil | 478 | 505 | - | - | |
Prci13g0168 | 892 | ProSitePatterns | Protein kinases ATP-binding region signature. | 539 | 560 | IPR017441 | GO:0005524 | |
Prci13g0168 | 892 | Gene3D | Phosphorylase Kinase; domain 1 | 512 | 606 | - | - | |
Prci13g0168 | 892 | ProSiteProfiles | Protein kinase domain profile. | 533 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci13g0168 | 892 | Pfam | Protein kinase domain | 536 | 790 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci13g0168 | 892 | SUPERFAMILY | Protein kinase-like (PK-like) | 516 | 792 | IPR011009 | - | |
Prci13g0168 | 892 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 652 | 664 | IPR008271 | GO:0004672|GO:0006468 | |
Prci13g0168 | 892 | SUPERFAMILY | RING/U-box | 818 | 891 | - | - | |
Prci13g0168 | 892 | Gene3D | Transferase(Phosphotransferase) domain 1 | 607 | 807 | - | - | |
Prci13g0168 | 892 | CDD | RING-Ubox_WDSUB1-like | 823 | 878 | - | - | |
Prci13g0168 | 892 | PANTHER | OS02G0152300 PROTEIN | 48 | 886 | - | - | |
Prci13g0168 | 892 | FunFam | receptor-like protein kinase FERONIA | 496 | 606 | - | - | |
Prci13g0168 | 892 | ProSiteProfiles | U-box domain profile. | 821 | 892 | IPR003613 | GO:0004842|GO:0016567 | |
Prci13g0168 | 892 | CDD | STK_N | 47 | 200 | - | - | |
Prci13g0168 | 892 | Coils | Coil | 401 | 449 | - | - | |
Prci13g0168 | 892 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 820 | 892 | IPR013083 | - | |
Prci13g0168 | 892 | MobiDBLite | consensus disorder prediction | 275 | 302 | - | - | |
Prci13g0168 | 892 | SMART | Ubox_2 | 825 | 888 | IPR003613 | GO:0004842|GO:0016567 | |
Prci13g0168 | 892 | SMART | serkin_6 | 533 | 802 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci13g0168 | Prci-Chr13 | 1069236 | 1075362 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci13g0168 | 1 | 892 | U-box Gene Family | AT2G45910 | 51.552 | 0.0 | 879 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Prci13g0168 | Pkinase | 9.5e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci13g0168 | - | - | gmx:100807515 | 1170.22 |