Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0168 ATGGCTGTGGTGAGTCCTGTGCCTGCAATCCCACGAAGTTTCGGTTCTGTGAGGTTGCCTCAAGATTTTGGGGTCACCAGCAACATGGCTGGGATGGGAGAAATTGTAGAGGAGCCTGAAACAGGTGTGGTTAATGACACTATCTACGTTGCTGTGACAAAAGATTTGAAAGAGAGCAAGTCAAATCTGACATGGGCGATACAAAACTCTGGAGGAAACAAGATTTGCATCCTCCATGTTCATGTGCCTGCAACTATGATCCCCTTGATGGGTACTAAATTTCCGGCCAGTTCACTGAAAGAAGACGAAGTTGAAGCATATAGGGAACTTGAAAGGCAAAACATGCATAAGAGTATAAATGAATATATTCTCTTCTCTTCACGAATGGGGGCCCGGGCAGAGAAGTTGCATATTGAAATGGAATGCGCTGAGAAAGGTATTGTAGAGCTTGCCTTTCAGCATGGCATCCGTGAGCTTGTCATGGGAGCAGCATCTGATAATCGTCATTCTAGGAAAATGATGGACCTCAAATCTAAGAAAGCCATTTATGTGCGGGAACATGCTCCAGCTTATTGTCAAATACGGTTTGTCTGCAAAGGGCGCCTTATACACAATAGAAATCGCTGTTTGGGTGATGGTAATGAAGAGGCTGCATCACCTTTGCCGCAGCATAGGCCAAGCCCTGTGCATTCACTTCACCTGAGATCCCAATCTATTACGTTGGGGCAGAATGATCGGGCAAGACTCATCAATGAAAAGCTTGAGTTACTTCGCAGAGCAAGGTCTGCTATTGCTGGGCAAGAACGCAAAACAGTGATCTTTTCTTCTCCAGACACTGAAGGGTTTTCCAGTCCAAGTAACAGATTGAGTGCAGAAGTTAGTAGTGATGGGTCAGACGGGCTGTTAAGAAAGAGTCCTTCAGTTTTCTCAACATGTTCTGAAAGTGGAACTGCTGAAGTGGCATTGACTCCAAAATTGATTTCTGAGGGGAGTGAGAATGTGATAGACTCAAGTGAATTTTCTCCAGCTATAGCAAGCCTCTGTCGTTCATCTCCTCCTAGCAATGGAGGAATGGATGATACTCTCTACTATCAGCTTGAACAGGCCATGTCTGAAGCTGAGAGTGCAAGGCGGGATGCCTTTCGAGAAACACTTAAGCGTGGGAAGGCTGAAAAAGAAGCAGTTGATGCTATGCGCAGGGCTAAAGCCTCTGAAAGCTTGTACAAAGAGGTACTCAAACAAAGGAAACAAATTGAGGAAGCACTAGCAAAAGAAAGAGAAGAACTTGAAGGGATGAAGAGCCTGAGAGACAAAGTTAAGGAAGAACTTAGACTTGCCCTAGATCAAAAGATGTGTTTGGGGAGTCAAATTGAATCATCTGAATTCATGGTAAGGGAGTTAAAACAAAAGATTATATCTGTTGTGGATCTGTTGACAATATGCAAGAAAGAAAGAGATGAGTTACAGATGCAGCGCAATGATGCATTAAAAGAAGCCGAGGAGTTGAGGAAAATAAAAGAAGACGTTTCAAGCACACATGGGCCTGAGTTGTTTTCAGAGTTCTCTTTTCAAGAGATTGAACAAGCAACGAGGAACTTCAATTCATCCCTAAAGATTGGAGAGGGTGGATATGGAAATATCTATAAAGGTGTCTTGCGTCACACCGAAGTGGCCATAAAAATGCTGCACGCAAACAACTCCTCACAGGGTCCCGCAGAGTTTCAACAGGAGGTTGATGTGTTGAGTAAGTTAAGACATCCGAACCTTATTACACTCATAGGAGCATGCCCAGAATCCTGGACTCTTGTCTACGAGTACCTCCCAAATGGAAGCCTCGAAGACCGGCTCAACTGCAAGGATAACACGGCTCCTCTATCATGGCAAGCTCGAATCCGCATTGCTGCTGAGCTCTGCTCTGCTCTCATCTTCCTTCATTCCTTTAGGCCTCACTGCATAGTGCACGGAGACTTGAAACCCTCAAATGTTCTACTTGATGCAAACTTTGTTAGCAAGCTCGGTGACTTTGGAATTTGCCGCATATTACCCAATATTGAGAGTTCAGGTGATGATACTACAGATTGTTGGAGAACTATTCCAAAGGGCACTCTAGTCTACATGGATCCCGAATTTCTCGCTTCCGGGGAACTCACTCTGAAATCAGATGTTTATTCATTTGGCATCATATTATTAAGATTGTTGACTGGGAGACCAGCCTTGGGAATAACAAAGGAAGTGCAGTACGCATTAGATTCTGGAAAGTTTCAATCCCTCTTGGATTCTTTGGCCGGAGACTGGCCATTTGTGCAGGCTGAACAGTTGGCTCGTGTGGCTCTGAGGTGTTGTGAGTTGAGCCGGAAAAATCGGCCAGATCTCAGGTCAGATGTCTGGAAAATACTGGAAGCGATGAGTGCTTTTTCTGGAGGCACATACTCCTTCAAGCCAGGTTATGAAGGGTCTGACCAGCCTCCTTCATATTTTATTTGTCCAATCTTTCAGGAAGTGATGCTAGATCCGCATATCGCAGCAGATGGTTTTTCTTATGAAGGTGAGGCTATACGAGGATGGTTCGATAGTGGTCACTCCACGTCACCCATGACAAATGCGAGGCTTGAACACCATAATCTTGTCCCGAACCATGCTCTTCGTTCCGCAATTCGGGACTGGCTACAACATCACTGA 2679 0.449 MAVVSPVPAIPRSFGSVRLPQDFGVTSNMAGMGEIVEEPETGVVNDTIYVAVTKDLKESKSNLTWAIQNSGGNKICILHVHVPATMIPLMGTKFPASSLKEDEVEAYRELERQNMHKSINEYILFSSRMGARAEKLHIEMECAEKGIVELAFQHGIRELVMGAASDNRHSRKMMDLKSKKAIYVREHAPAYCQIRFVCKGRLIHNRNRCLGDGNEEAASPLPQHRPSPVHSLHLRSQSITLGQNDRARLINEKLELLRRARSAIAGQERKTVIFSSPDTEGFSSPSNRLSAEVSSDGSDGLLRKSPSVFSTCSESGTAEVALTPKLISEGSENVIDSSEFSPAIASLCRSSPPSNGGMDDTLYYQLEQAMSEAESARRDAFRETLKRGKAEKEAVDAMRRAKASESLYKEVLKQRKQIEEALAKEREELEGMKSLRDKVKEELRLALDQKMCLGSQIESSEFMVRELKQKIISVVDLLTICKKERDELQMQRNDALKEAEELRKIKEDVSSTHGPELFSEFSFQEIEQATRNFNSSLKIGEGGYGNIYKGVLRHTEVAIKMLHANNSSQGPAEFQQEVDVLSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLNCKDNTAPLSWQARIRIAAELCSALIFLHSFRPHCIVHGDLKPSNVLLDANFVSKLGDFGICRILPNIESSGDDTTDCWRTIPKGTLVYMDPEFLASGELTLKSDVYSFGIILLRLLTGRPALGITKEVQYALDSGKFQSLLDSLAGDWPFVQAEQLARVALRCCELSRKNRPDLRSDVWKILEAMSAFSGGTYSFKPGYEGSDQPPSYFICPIFQEVMLDPHIAADGFSYEGEAIRGWFDSGHSTSPMTNARLEHHNLVPNHALRSAIRDWLQHH 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0168 892 Coils Coil 250 270 - -
Prci13g0168 892 Pfam U-box domain 823 892 IPR003613 GO:0004842|GO:0016567
Prci13g0168 892 Coils Coil 478 505 - -
Prci13g0168 892 ProSitePatterns Protein kinases ATP-binding region signature. 539 560 IPR017441 GO:0005524
Prci13g0168 892 Gene3D Phosphorylase Kinase; domain 1 512 606 - -
Prci13g0168 892 ProSiteProfiles Protein kinase domain profile. 533 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0168 892 Pfam Protein kinase domain 536 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0168 892 SUPERFAMILY Protein kinase-like (PK-like) 516 792 IPR011009 -
Prci13g0168 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Prci13g0168 892 SUPERFAMILY RING/U-box 818 891 - -
Prci13g0168 892 Gene3D Transferase(Phosphotransferase) domain 1 607 807 - -
Prci13g0168 892 CDD RING-Ubox_WDSUB1-like 823 878 - -
Prci13g0168 892 PANTHER OS02G0152300 PROTEIN 48 886 - -
Prci13g0168 892 FunFam receptor-like protein kinase FERONIA 496 606 - -
Prci13g0168 892 ProSiteProfiles U-box domain profile. 821 892 IPR003613 GO:0004842|GO:0016567
Prci13g0168 892 CDD STK_N 47 200 - -
Prci13g0168 892 Coils Coil 401 449 - -
Prci13g0168 892 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 820 892 IPR013083 -
Prci13g0168 892 MobiDBLite consensus disorder prediction 275 302 - -
Prci13g0168 892 SMART Ubox_2 825 888 IPR003613 GO:0004842|GO:0016567
Prci13g0168 892 SMART serkin_6 533 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0168 Prci-Chr13 1069236 1075362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0168 1 892 U-box Gene Family AT2G45910 51.552 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci13g0168 Pkinase 9.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0168 - - gmx:100807515 1170.22