Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0166 ATGGCTGTGGTGAGTCCTGTGCCTGCAATCCCACGAAGTTTCGGTTCTGTGAGGTTGCCTCAAGATTTTGGGGTCACCAGCAACATGGCTGGGATGGGAGAAATTGTAGAGGAGCCTGAAACAGGTGTGGTTAATGACACTATCTACGTTGCTGTGACAAAAGATTTGAAAGAGAGCAAGTCAAATCTGACATGGGCGATACAAAACTCTGGAGGAAACAAGATTTGCATCCTCCATGTTCATGTGCCTGCAACTATGATCCCCTTGATGGGTACTAAATTTCCGGCCAGTTCACTGAAAGAAGACGAAGTTGAAGCATATAGGGAACTTGAAAGGCAAAACATGCATAAGAGTATAAATGAATATATTCTCTTCTCTTCACGAATGGGGGCCCGGGCAGAGAAGTTGCATATTGAAATGGAATGCGCTGAGAAAGGTATTGTAGAGCTTGCCTTTCAGCATGGCATCCGTGAGCTTGTCATGGGAGCAGCATCTGATAATCGTCATTCTAGGAAAATGATGGACCTCAAATCTAAGAAAGCCATTTATGTGCGGGAACATGCTCCAGCTTATTGTCAAATACGGTTTGTCTGCAAAGGGCGCCTTATACACAATAGAAATCGCTGTTTGGGTGATGGTAATGAAGAGGCTGCATCACCTTTGCCGCAGCATAGGCCAAGCCCTGTGCATTCACTTCACCTGAGATCCCAATCTATTACGTTGGGGCAGAATGATCGGGCAAGACTCATCAATGAAAAGCTTGAGTTACTTCGCAGAGCAAGGTCTGCTATTGCTGGGCAAGAACGCAAAACAGTGATCTTTTCTTCTCCAGACACTGAAGGGTTTTCCAGTCCAAGTAACAGATTGAGTGCAGAAGTTAGTAGTGATGGGTCAGACGGGCTGTTAAGAAAGAGTCCTTCAGTTTTCTCAACATGTTCTGAAAGTGGAACTGCTGAAGTGGCATTGACTCCAAAATTGATTTCTGAGGGGAGTGAGAATGTGATAGACTCAAGTGAATTTTCTCCAGCTATAGCAAGCCTCTGTCGTTCATCTCCTCCTAGCGTACTGCTACTCCTAATTTCAAGCAATGGAGGAATGGATGATACTCTCTACTATCAGCTTGAACAGGCCATGTCTGAAGCTGAGAGTGCAAGGCGGGATGCCTTTCGAGAAACACTTAAGCGTGGGAAGGCTGAAAAAGAAGCAGTTGATGCTATGCGCAGGGCTAAAGCCTCTGAAAGCTTGTACAAAGAGGTACTCAAACAAAGGAAACAAATTGAGGAAGCACTAGCAAAAGAAAGAGAAGAACTTGAAGGGATGAAGAGCCTGAGAGACAAAGTTAAGGAAGAACTTAGACTTGCCCTAGATCAAAAGATGTGTTTGGGGAGTCAAATTGAATCATCTGAATTCATGGTAAGGGAGTTAAAACAAAAGATTATATCTGTTGTGGATCTGTTGACAATATGCAAGAAAGAAAGAGATGAGTTACAGATGCAGCGCAATGATGCATTAAAAGAAGCCGAGGAGTTGAGGAAAATAAAAGAAGACGTTTCAAGCACACATGGGCCTGAGTTGTTTTCAGAGTTCTCTTTTCAAGAGATTGAACAAGCAACGAGGAACTTCAATTCATCCCTAAAGATTGGAGAGGGTGGATATGGAAATATCTATAAAGGTGTCTTGCGTCACACCGAAGTGGCCATAAAAATGCTGCACGCAAACAACTCCTCACAGGGTCCCGCAGAGTTTCAACAGGAGGTTGATGTGTTGAGTAAGTTAAGACATCCGAACCTTATTACACTCATAGGAGCATGCCCAGAATCCTGGACTCTTGTCTACGAGTACCTCCCAAATGGAAGCCTCGAAGACCGGCTCAACTGCAAGGATAACACGGCTCCTCTATCATGGCAAGCTCGAATCCGCATTGCTGCTGAGCTCTGCTCTGCTCTCATCTTCCTTCATTCCTTTAGGCCTCACTGCATAGTGCACGGAGACTTGAAACCCTCAAATGTTCTACTTGATGCAAACTTTGTTAGCAAGCTCGGTGACTTTGGAATTTGCCGCATATTACCCAATATTGAGAGTTCAGGTGATGATACTACAGATTGTTGGAGAACTATTCCAAAGGGCACTCTAGTCTACATGGATCCCGAATTTCTCGCTTCCGGGGAACTCACTCTGAAATCAGATGTTTATTCATTTGGCATCATATTATTAAGATTGTTGACTGGGAGACCAGCCTTGGGAATAACAAAGGAAGTGCAGTACGCATTAGATTCTGGAAAGTTTCAATCCCTCTTGGATTCTTTGGCCGGAGACTGGCCATTTGTGCAGGCTGAACAGTTGGCTCGTGTGGCTCTGAGGTGTTGTGAGTTGAGCCGGAAAAATCGGCCAGATCTCAGGTCAGATGTCTGGAAAATACTGGAAGCGATGAGTGCTTTTTCTGGAGGCACATACTCCTTCAAGCCAGGTTATGAAGGGTCTGACCAGCCTCCTTCATATTTTATTTGTCCAATCTTTCAGGAAGTGATGCTAGATCCGCATATCGCAGCAGATGGTTTTTCTTATGAAGGTGAGGCTATACGAGGATGGTTCGATAGTGGTCACTCCACGTCACCCATGACAAATGCGAGGCTTGAACACCATAATCTTGTCCCGAACCATGCTCTTCGTTCCGCAATTCGGGACTGGCTACAACATCACTGA 2703 0.4488 MAVVSPVPAIPRSFGSVRLPQDFGVTSNMAGMGEIVEEPETGVVNDTIYVAVTKDLKESKSNLTWAIQNSGGNKICILHVHVPATMIPLMGTKFPASSLKEDEVEAYRELERQNMHKSINEYILFSSRMGARAEKLHIEMECAEKGIVELAFQHGIRELVMGAASDNRHSRKMMDLKSKKAIYVREHAPAYCQIRFVCKGRLIHNRNRCLGDGNEEAASPLPQHRPSPVHSLHLRSQSITLGQNDRARLINEKLELLRRARSAIAGQERKTVIFSSPDTEGFSSPSNRLSAEVSSDGSDGLLRKSPSVFSTCSESGTAEVALTPKLISEGSENVIDSSEFSPAIASLCRSSPPSVLLLLISSNGGMDDTLYYQLEQAMSEAESARRDAFRETLKRGKAEKEAVDAMRRAKASESLYKEVLKQRKQIEEALAKEREELEGMKSLRDKVKEELRLALDQKMCLGSQIESSEFMVRELKQKIISVVDLLTICKKERDELQMQRNDALKEAEELRKIKEDVSSTHGPELFSEFSFQEIEQATRNFNSSLKIGEGGYGNIYKGVLRHTEVAIKMLHANNSSQGPAEFQQEVDVLSKLRHPNLITLIGACPESWTLVYEYLPNGSLEDRLNCKDNTAPLSWQARIRIAAELCSALIFLHSFRPHCIVHGDLKPSNVLLDANFVSKLGDFGICRILPNIESSGDDTTDCWRTIPKGTLVYMDPEFLASGELTLKSDVYSFGIILLRLLTGRPALGITKEVQYALDSGKFQSLLDSLAGDWPFVQAEQLARVALRCCELSRKNRPDLRSDVWKILEAMSAFSGGTYSFKPGYEGSDQPPSYFICPIFQEVMLDPHIAADGFSYEGEAIRGWFDSGHSTSPMTNARLEHHNLVPNHALRSAIRDWLQHH 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0166 900 Coils Coil 250 270 - -
Prci13g0166 900 FunFam receptor-like protein kinase FERONIA 504 614 - -
Prci13g0166 900 ProSiteProfiles U-box domain profile. 829 900 IPR003613 GO:0004842|GO:0016567
Prci13g0166 900 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 828 900 IPR013083 -
Prci13g0166 900 ProSitePatterns Protein kinases ATP-binding region signature. 547 568 IPR017441 GO:0005524
Prci13g0166 900 CDD RING-Ubox_WDSUB1-like 831 886 - -
Prci13g0166 900 Coils Coil 409 457 - -
Prci13g0166 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Prci13g0166 900 PANTHER OS02G0152300 PROTEIN 48 894 - -
Prci13g0166 900 Gene3D Phosphorylase Kinase; domain 1 520 614 - -
Prci13g0166 900 MobiDBLite consensus disorder prediction 275 301 - -
Prci13g0166 900 SUPERFAMILY RING/U-box 826 899 - -
Prci13g0166 900 ProSiteProfiles Protein kinase domain profile. 541 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0166 900 Gene3D Transferase(Phosphotransferase) domain 1 615 815 - -
Prci13g0166 900 Coils Coil 486 513 - -
Prci13g0166 900 Pfam Protein kinase domain 544 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0166 900 SMART Ubox_2 833 896 IPR003613 GO:0004842|GO:0016567
Prci13g0166 900 CDD STK_N 47 200 - -
Prci13g0166 900 SMART serkin_6 541 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0166 900 Pfam U-box domain 831 900 IPR003613 GO:0004842|GO:0016567
Prci13g0166 900 SUPERFAMILY Protein kinase-like (PK-like) 524 800 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0166 Prci-Chr13 1069095 1075362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0166 365 900 U-box Gene Family AT2G45910 62.011 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Prci13g0166 Pkinase 9.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0166 - - gmx:100807515 1165.98