Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0142 ATGGGGATTCAGTGCTCCAGACTCATTCCATGTTGTGTGAATTCACAAGTAAAGGCTTCCATTCTTGAAGCTCCAGATACTGAAAAGGAGGAAAGAAGTGAGGCTAATAACTGGCCTGCATTCCGTGAATTTTCATTAGAGCATCTAAAGAATGCAACATCTGGTTTTGCTGTTGAGAATATTGTATCTGAACATGGAGAGAAGGCACCAAATGTTGTTTATAAAGGAAAGCTGGAGAATCAAATGAGGATTGCTGTTAAGCGCTTTAATAGAAATGCTTGGCCTGATGGCCGGCAGTTTTTGGAGGAAGCGAGATCTGTTGGTGAACTCCGCAACCAGCGACTAGCAAATTTGATTGGTTGTTGTTGTGAAGGTGATGAGAGGTTGCTTGTGGCAGAATTTATGCCAAATGAAACACTGGCAAAACACCTTTTCCATTGGGAAACACAGCCTATGCAATGGGCAATGCGATTAAGAGTTGTTTTCCATCTTGCACAAGCTCTAGAATATTGCACAGGAAAAGGGCGTGCCCTCTATCATGACCTTAATGCATACAGAGTTTTATTTGATGAGGATGGCAATCCTAGGCTTTCTACTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAGAGTTATAGCACAAATTTGGCTTTTACCCCTCCAGAATATCTGAGAACTGGGAGAGTAACAGCAGAAAGTGTAATATATAGTTTCGGCACTCTTTTGCTTGACCTTCTAAGTGGGAAGCATATCCCCCCAAGCCATGCCCTTGATTTAATTCGAGACAGAAATCTTCAAATGCTTACAGATTCTTGTTTGGAAGGACAATTTTCGGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGTTGCTTACAGTATGAACCTAGAGAAAGGCCTAATCCTAGATCATTGGTGGCTGCCTTGGCTCCTCTTCAGAAAGAAACAGAGGTTTCTTCACATGTCTTGATGGGAATCCCACATGGTGATGCTACCTTTGCTTCGTTGTCCCCACTTGGTGAAGCATGCTCGAGAAAGGATTTGACTGCCATACATGAAGTTCTGGAAAATATTGGCTATAAAGATGATGAAGGAGTGACAAATGAGCTATCGTTCCAGGTTTGGACTGATGAAATGCAGGAAACACTTAACAGTAAGAAAAAGGGGGACGTTGCTTTCCAGCAGAAGGATTTTAGAGTTGCAATAGGGTGCTACACACAGAAACTTGTTTCAAAATGA 1242 0.4227 MGIQCSRLIPCCVNSQVKASILEAPDTEKEERSEANNWPAFREFSLEHLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDGRQFLEEARSVGELRNQRLANLIGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMQWAMRLRVVFHLAQALEYCTGKGRALYHDLNAYRVLFDEDGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTAESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPRSLVAALAPLQKETEVSSHVLMGIPHGDATFASLSPLGEACSRKDLTAIHEVLENIGYKDDEGVTNELSFQVWTDEMQETLNSKKKGDVAFQQKDFRVAIGCYTQKLVSK 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0142 413 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Prci13g0142 413 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Prci13g0142 413 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Prci13g0142 413 SUPERFAMILY Protein kinase-like (PK-like) 35 315 IPR011009 -
Prci13g0142 413 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 19 408 IPR045845 GO:0004672|GO:0009742
Prci13g0142 413 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Prci13g0142 413 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Prci13g0142 413 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0142 Prci-Chr13 893166 900456 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0142 10 331 Glycoside Hydrolase AT3G07070 32.857 6.76e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Prci13g0142 PK_Tyr_Ser-Thr 4.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0142 K14500 - gmx:100781311 754.207