Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0110 ATGCAGTTGCAGCAAGAACCATCAACAAGTCAGATATTTTCATTGATCACCTTGTATCAAAGATTCACTCTAAACATAAATCTCGGAAGAGAACTTACAACTCTTGAGATTAGAGATGCTTTGATTCCTTATCTTGAATCCCTTTTTGAAGAATATGGAGACATTTTGATGGATTTTGTGGAAAACTATCCAAACCCACCTGTCAAGGAAAAGCCTACGCCAATCTCTATCCCTAGTTCATTGGTGAAATCGAAGAAGACGAAAGCCATGTCTCGAGCAAGCGAGGTAGACCCAGCTGGCAAGCTTCGTCCTCATATTGTCTATCTATTGGAGTTTGGCATGAATATTGAGCAGATCAAGAGTATCACTCGAAGATTTCCTTCCTTTGCCTATTATAGCTTAGATGGAAAAATCAAACCAGTAGTTGAATTTCTTTTAGAACTTGGAGTTCCAAAAGAAGACATTCCCATCATTCTCACTAAAAGGCCTCAGTTGTGTGGTATCAGTCTCTCTGAGAATCTCAAACCTACCATGAAGTTCTTGGAAACCCTGGGTGTAGACAAGCAGCAATGGGCCAAGGTGATATACAGATTTCCAGCTCTTCTAACTTATAGCAAGCAAAAGGTGAAAACAAGTGTGGAGTTCCTCTATGAAATAGGTCTTTCAGAGGAGAACATAGGTAAAATCTTAACTCGCTTCCCCAATATTATCAGTTACAATGTGGAAGGCAAGCTACGACCAACAGCAAATTACTTTCGTTCCCTGGGAGTTGATGTTGGTATTCTTCTATTTCGATGTCCACAAAATTTTGGTCTTAGCATTGATGCTAATCTAAAGCCTGTGACGGGATTTTTCTTAGAGAAAGGATACACAGTACAGGAAGTTGGGACCATGATTTCAAGATATGGATCATTGTATACATTTAGCCTGGCAGATAATTTGATTCCAAAGTGGGAATTTTTTGTGACTATGGACTACCCCAAATCAGAGCTGGTTAAGTTCCCTCAGTTTTTTGGTTACAGTTTGGAAGAGAGGATTAAACGGAGATATGCTCTAATGAAAGAGTGCAGAGTGAAGTTGCTGCTAAACCAGCTTCTGTCTCTGTCAAATAGTGACTTTGAGGAGGCCTTGGAAAAGAAAATGAAGAAAATGCAGCTTGACCAGGATTCTAGTTCTAGTGCCGAACATGTTCAATCACATGAGGAAAAATGA 1212 0.3969 MQLQQEPSTSQIFSLITLYQRFTLNINLGRELTTLEIRDALIPYLESLFEEYGDILMDFVENYPNPPVKEKPTPISIPSSLVKSKKTKAMSRASEVDPAGKLRPHIVYLLEFGMNIEQIKSITRRFPSFAYYSLDGKIKPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPTMKFLETLGVDKQQWAKVIYRFPALLTYSKQKVKTSVEFLYEIGLSEENIGKILTRFPNIISYNVEGKLRPTANYFRSLGVDVGILLFRCPQNFGLSIDANLKPVTGFFLEKGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFVTMDYPKSELVKFPQFFGYSLEERIKRRYALMKECRVKLLLNQLLSLSNSDFEEALEKKMKKMQLDQDSSSSAEHVQSHEEK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0110 403 PANTHER CGI-12 PROTEIN-RELATED 110 378 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 SMART mt_12 260 291 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 SMART mt_12 227 258 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 SMART mt_12 328 359 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 SMART mt_12 120 151 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 SMART mt_12 296 327 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 SMART mt_12 192 222 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 MobiDBLite consensus disorder prediction 384 403 - -
Prci13g0110 403 Pfam mTERF 108 288 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 Pfam mTERF 218 374 IPR003690 GO:0003690|GO:0006355
Prci13g0110 403 Gene3D Transcription termination factor 3, mitochondrial 163 383 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0110 Prci-Chr13 749258 750854 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci13g0110 mTERF 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0110 K15031 - qsa:O6P43_004791 576.244