Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0108 ATGGTGATTCCTCATCTAAAAGGCCTTGCCCTGCATTCCTCTTGGATAAGAGTGTACACTAGCACGAGGACTCAACTTTGCAAGCCTGCCAAGGTTTTCTTTTGCCGGGCAAAAAGTGATGGGTCATTGAAGTCAATGCCTCCAACCCTGTTAGCAGCAGAAAAGGAAGAAGCAAAGGCTGTGTTAACTTTGTTTTTGAAGAAACAAGGCTTGAGTAATGCAGTTGCAGCAAGAACCATCAACAAGTCAGATATTTTCATTGATCACCTTGTATCAAAGATTCACTCTAAACATAAATCTCGGTACCTAGTAGGAAGAGAACTTACAACTCTTGAGATTAGAGATGCTTTGATTCCTTATCTTGAATCCCTTTTTGAAGAATATGGAGACATTTTGATGGATTTTGTGGAAAACTATCCAAACCCACCTGTCAAGGAAAAGCCTACGCCAATCTCTATCCCTAGTTCATTGGTGAAATCGAAGAAGACGAAAGCCATGTCTCGAGCAAGCGAGGTAGACCCAGCTGGCAAGCTTCGTCCTCATATTGTCTATCTATTGGAGTTTGGCATGAATATTGAGCAGATCAAGAGTATCACTCGAAGATTTCCTTCCTTTGCCTATTATAGCTTAGATGGAAAAATCAAACCAGTAGTTGAATTTCTTTTAGAACTTGGAGTTCCAAAAGAAGACATTCCCATCATTCTCACTAAAAGGCCTCAGTTGTGTGGTATCAGTCTCTCTGAGAATCTCAAACCTACCATGAAGTTCTTGGAAACCCTGGGTGTAGACAAGCAGCAATGGGCCAAGGTGATATACAGATTTCCAGCTCTTCTAACTTATAGCAAGCAAAAGGTGAAAACAAGTGTGGAGTTCCTCTATGAAATAGGTCTTTCAGAGGAGAACATAGGTAAAATCTTAACTCGCTTCCCCAATATTATCAGTTACAATGTGGAAGGCAAGCTACGACCAACAGCAAATTACTTTCGTTCCCTGGGAGTTGATGTTGGTATTCTTCTATTTCGATGTCCACAAAATTTTGGTCTTAGCATTGATGCTAATCTAAAGCCTGTGACGGGATTTTTCTTAGAGAAAGGATACACAGTACAGGAAGTTGGGACCATGATTTCAAGATATGGATCATTGTATACATTTAGCCTGGCAGATAATTTGATTCCAAAGTGGGAATTTTTTGTGACTATGGACTACCCCAAATCAGAGCTGGTTAAGTTCCCTCAGTTTTTTGGTTACAGTTTGGAAGAGAGGATTAAACGGAGATATGCTCTAATGAAAGAGTGCAGAGTGAAGTTGCTGCTAAACCAGCTTCTGTCTCTGTCAAATAGTGACTTTGAGGAGGCCTTGGAAAAGAAAATGAAGAAAATGCAGCTTGACCAGGATTCTAGTTCTAGTGCCGAACATGTTCAATCACATGAGGAAAAATGA 1440 0.4049 MVIPHLKGLALHSSWIRVYTSTRTQLCKPAKVFFCRAKSDGSLKSMPPTLLAAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDIFIDHLVSKIHSKHKSRYLVGRELTTLEIRDALIPYLESLFEEYGDILMDFVENYPNPPVKEKPTPISIPSSLVKSKKTKAMSRASEVDPAGKLRPHIVYLLEFGMNIEQIKSITRRFPSFAYYSLDGKIKPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPTMKFLETLGVDKQQWAKVIYRFPALLTYSKQKVKTSVEFLYEIGLSEENIGKILTRFPNIISYNVEGKLRPTANYFRSLGVDVGILLFRCPQNFGLSIDANLKPVTGFFLEKGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFVTMDYPKSELVKFPQFFGYSLEERIKRRYALMKECRVKLLLNQLLSLSNSDFEEALEKKMKKMQLDQDSSSSAEHVQSHEEK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0108 479 Pfam mTERF 185 364 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 Pfam mTERF 294 450 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 PANTHER CGI-12 PROTEIN-RELATED 160 454 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 Gene3D Transcription termination factor 3, mitochondrial 239 459 IPR038538 -
Prci13g0108 479 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 SMART mt_12 404 435 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 SMART mt_12 268 298 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 SMART mt_12 372 403 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 SMART mt_12 303 334 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 SMART mt_12 196 227 IPR003690 GO:0003690|GO:0006355
Prci13g0108 479 MobiDBLite consensus disorder prediction 460 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0108 Prci-Chr13 746345 750854 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci13g0108 mTERF 1.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0108 K15031 - qsa:O6P43_004791 696.041