Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0074 ATGAATATGATGCGACGGCTGAAGAGCATTGCTTCTGGGCGAACTTCCATTTCGTCAGATCCTGGAGGGGATTCTAATACCAAGAGAGCTAAGTTTGATCAAGAAACTGAAGGAAGAGTCAATGAGGAAACAAATCCTGTTGAGAGAGGCAGCACACACGTTGAGCAGCATGGTTGTGCGCCAGGAGATACTACTGTAGGATCATCCAATGTATCTTTGGTGGATAGAACAGAGAAATCAGGTTATGACCAGCTTCCTAAAGAATTGAATGAAATGAAAATTAGAGATGAGAAGGGCAACAACCGCAATGAAAAGGATATGGAGCCAAGTATTGTCAATGGCAATGGAACTGAAACAGGGCAGGTAATTACTACAGCAATTGGTGGTCGTGATGGACAACCAAAGCAGACCATATCATACATGGCAGAACGTGTGGTTGGTACTGGTTCCTTTGGTGTTGTTTTCCAGGCTAGGTGCCTTGAAACTGGTGAAACGGTTGCCATAAAGAAGGTTTTGCAAGACAAGAGATACAAGAACAGGGAACTACAGGTTATGCGCATACTTGACCATCCCAATGTTATTCAACTAAAGCACTGTTTCTTTTCAACCACTGAAAAAGATGAGTTGTACCTGAACCTGGTTTTGGAGTATGTACCAGAAACCGTCTACAGAGTTTCAAAGCACTATATCAGAATGCATCAACATATGCCTATTATTTATATACAACTGTATACATACCAGATATGCCGTGCATTAAACTATCTACATCATGTACTTGGCGTCTGCCACCGTGACATCAAACCACAGAATTTATTGGTTAATCCTCATTCTCATCAGCTAAAGATATGTGATTTTGGGAGTGCAAAGATGCTGCCTATGTTCCCTGGGGAGAGTGGAGTTGATCAGTTGGTGGAAATCATTAAGATATTGGGGACACCAACCAGGGAAGAAATAAAGTGCATGAATCCAAATTACTCTGAATTTAAGTTTCCTCAGATTAAAGCACACCCATGGCACAAGGTTTTCCACAAGAGAATGCCTTCAGAAGCGGTTGATCTTGTATCAAGGCTGCTCCAGTATTCACCAAATCTGCGGTGCACTGCTTTGGAAGCATGTGCACACCCCTTTTTCAATGATCTGAGAGACCCAAATGTGTGCTTGCCGAATGGGCGGCCGCTGCCTCCTTTGTTTGACTTTACAGCACAAGAGTTGGCTGGTGCACCTGCTGAGTTGCGTCATCGACTCATTCCCGAACACGCAAGGAGTTGA 1269 0.435 MNMMRRLKSIASGRTSISSDPGGDSNTKRAKFDQETEGRVNEETNPVERGSTHVEQHGCAPGDTTVGSSNVSLVDRTEKSGYDQLPKELNEMKIRDEKGNNRNEKDMEPSIVNGNGTETGQVITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELQVMRILDHPNVIQLKHCFFSTTEKDELYLNLVLEYVPETVYRVSKHYIRMHQHMPIIYIQLYTYQICRALNYLHHVLGVCHRDIKPQNLLVNPHSHQLKICDFGSAKMLPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYSEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCTALEACAHPFFNDLRDPNVCLPNGRPLPPLFDFTAQELAGAPAELRHRLIPEHARS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0074 422 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 104 291 - -
Prci13g0074 422 Gene3D Phosphorylase Kinase; domain 1 125 219 - -
Prci13g0074 422 FunFam Glycogen synthase kinase-3 beta 124 219 - -
Prci13g0074 422 MobiDBLite consensus disorder prediction 9 25 - -
Prci13g0074 422 MobiDBLite consensus disorder prediction 1 69 - -
Prci13g0074 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Prci13g0074 422 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Prci13g0074 422 ProSiteProfiles Protein kinase domain profile. 140 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0074 422 CDD STKc_GSK3 135 380 IPR039192 -
Prci13g0074 422 Gene3D Transferase(Phosphotransferase) domain 1 220 291 - -
Prci13g0074 422 Gene3D Transferase(Phosphotransferase) domain 1 292 421 - -
Prci13g0074 422 MobiDBLite consensus disorder prediction 97 118 - -
Prci13g0074 422 SMART serkin_6 140 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0074 422 MobiDBLite consensus disorder prediction 26 50 - -
Prci13g0074 422 SUPERFAMILY Protein kinase-like (PK-like) 139 402 IPR011009 -
Prci13g0074 422 Pfam Protein kinase domain 140 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0074 Prci-Chr13 554545 559762 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0074 140 419 MAP Kinase Gene Family AT1G73670 30.029 1.41e-30 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Prci13g0074 Pkinase 3.3e-35 CL0016