Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0069 ATGAGTTTTGTGGGTTTTCCGGATAATCCCTCCTACAGCAGCAACGATTCGTCTAGAATGCCCTCCGGTGCAATCTCACAGCCTCGACTTCTCACTTCCACTCCCACTGCTAAAGCCATGTTCAACTCTCCAGGCCTCTCACTTGCCCTTCAAACGGGTATAGATGGGCCAAGGGATGGAAATAGGATGTCTGAGAATTACGAGATGAATGTTAATGGGAGAAGAAGCAGAGAAGAAGAGCAAGAAAGCAGATCTGGAAGTGATAACGTGGAAGTTGCTTCCGGCGATGATCAGGATGCCTCCGATCACCCTCCCAGGAAAAAGCGCTATCACCGACACACCCCTCAACAGATACAAGAACTTGAATCTTTGTTCAAGGAGTGTCCTCATCCAGACGAGAAGCAGAGATTGGAACTGAGCAAGAGGCTTTGTTTGGAGACAAGGCAGGTGAAATTCTGGTTCCAGAATAGAAGAACTCAGATGAAGACCCAATTGGAACGCCATGAGAATACACTGCTCAGGCAAGAGAATGACAAGCTTAGGGCGGAGAACATGTCCATCAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGTCCAGCTATAATAGGAGAAATTTCACTCGAGGAACATCACCTTCGGGTTGAAAACGCCCGGTTAAAGGATGAATTAGACCGGGTATGTGCCCTCGCCGGCAAGTTCCTCGGCCGCCCAGTTTCGTCATATCCCAACTCAATGGCCCCTCCGTTGGCAAACTCAAGTTTGGAGCTAGGAGTTGGAAGCAATGGCTTTGGTGGTATAAGCACTGTGCCTGCAACACTGCCCATGGGGCCTGACCTGGGCATTGGTATTTCTAGCCCTTTAGCCATGGGAGCTCCTCCTCATCCTCCTCCAGGGAGGCCGGCCAGCGCCGGGCTGACCGGGCTCGATAGATCAATAGAGAGGTCTATGTTTCTCGAGCTTGCTTTGGCTGCCATGGATGAATTGGTGAAGATGGCTCAGACTGATGAGCCTCTATGGATCAGGAGTTTGGAAGGTGGGAGAGAAATCCTCAGCCTCGACGAGTACTCAAGGACTTTCACTCCTTGCATTGGCTTAAAACCTAATGGCTTCGCGTCTGAAGCCTCGAGGGAGACTGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTTTAATGGACTCGAATCGTTGGGCAGAAATGTTTCCTTGCATGATTGCAAGAACTTCCACCACTGAAGTGATATCTAGTGGAATAAATGGAACCAGAAACGGTGCTCTCCAACTAATGCATGCGGAGCTGCAAGTTCTATCGCCATTGGTACCGGTTCGGGAGGTGAATTTCCTGCGGTTCTGCAAGCAGCACGCGGATGGAGTGTGGGCTGTTGTGGACGTATCCATCGATGGTGTCCGGGAAACTTCTGGTGCACCACCTTTTGTGAGCTGTAGGAGGCTTCCTTCTGGCTGTGTAGTTCAAGACATGCCTAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAGTACGATGAAAGCCAGGTTCACCAGCTGTATAGACCCTTGTTAAGTTCAGGCTTGGGTTTTGGCGCGCAACGCTGGATCGCCACCCTCCATCGTCAATGCGAATGCCTCGCCGTTTTGATGTCCTCATCAGTTCCTTCGCGAGACCATTCTGCCATTACTGCCGGCGGGCGACGGAGCATGCTGAAGCTGGCCCAGCGCATGACTACCAACTTTTGCGCCGGCGTCTGTGCCTCGACGGTGCACAAGTGGAACAAGCTCAACGCCGGCAACGTTGGCGAGGATGTCCGGGTCATGACCCGCAAGAGTGTCGACGACCCGGGGGAACCGCCGGGGATAGTGCTGAGTGCTGCCACGTCGGTGTGGCTGCCGGTGTCGCCGCAGCGACTGTTCGATTTCCTCCGCGACGAACGGCTCCGGAGCGAGTGGGACATACTGTCGAATGGTGGGCCCATGCAGGAGATGGCCCACATTGCCAAGGGCGGCCAGGACCACGGCAACTGCGTCTCCCTCCTTCGAGCCAGTGCTATGAATTCGAGCCAGAGCAGCATGCTAATATTGCAGGAGACCTGCATCGACGCGGCTGGGGCGCTGGTGGTGTACGCGCCGGTGGATATTCCGGCGATGCACCTGGTCATGAACGGCGGCGATTCAGCTTACGTGGCACTACTTCCCTCAGGGTTTGTGATCGTGCCGGACGGCTCAGGGTCTCGAGGGTCCCAAACGTCGGTCAGCAACGGCGGCAGGGAAAGGGGGTCGCTCCTGACGGTGGCGTTCCAGATATTGGTGAATAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCGGTGGAGACGGTGAACAACCTCATCTCTTGTACGGTGCAGAAGATAAAGGCAGCGCTTCCATGCGAAAGCTGA 2427 0.5418 MSFVGFPDNPSYSSNDSSRMPSGAISQPRLLTSTPTAKAMFNSPGLSLALQTGIDGPRDGNRMSENYEMNVNGRRSREEEQESRSGSDNVEVASGDDQDASDHPPRKKRYHRHTPQQIQELESLFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIIGEISLEEHHLRVENARLKDELDRVCALAGKFLGRPVSSYPNSMAPPLANSSLELGVGSNGFGGISTVPATLPMGPDLGIGISSPLAMGAPPHPPPGRPASAGLTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSLEGGREILSLDEYSRTFTPCIGLKPNGFASEASRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTEVISSGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHADGVWAVVDVSIDGVRETSGAPPFVSCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGLGFGAQRWIATLHRQCECLAVLMSSSVPSRDHSAITAGGRRSMLKLAQRMTTNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGGQDHGNCVSLLRASAMNSSQSSMLILQETCIDAAGALVVYAPVDIPAMHLVMNGGDSAYVALLPSGFVIVPDGSGSRGSQTSVSNGGRERGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPCES 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0069 808 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 103 804 IPR042160 -
Prci13g0069 808 SMART HOX_1 105 168 IPR001356 GO:0003677
Prci13g0069 808 MobiDBLite consensus disorder prediction 71 86 - -
Prci13g0069 808 Pfam Homeodomain 107 162 IPR001356 GO:0003677
Prci13g0069 808 Gene3D - 93 180 - -
Prci13g0069 808 FunFam Homeobox-leucine zipper protein HDG1 94 180 - -
Prci13g0069 808 MobiDBLite consensus disorder prediction 1 49 - -
Prci13g0069 808 Pfam START domain 322 546 IPR002913 GO:0008289
Prci13g0069 808 Gene3D - 379 539 IPR023393 -
Prci13g0069 808 SUPERFAMILY Homeodomain-like 93 164 IPR009057 -
Prci13g0069 808 SMART START_1 322 546 IPR002913 GO:0008289
Prci13g0069 808 Coils Coil 158 190 - -
Prci13g0069 808 SUPERFAMILY Bet v1-like 315 546 - -
Prci13g0069 808 ProSitePatterns 'Homeobox' domain signature. 139 162 IPR017970 GO:0000981|GO:0006355
Prci13g0069 808 ProSiteProfiles START domain profile. 313 549 IPR002913 GO:0008289
Prci13g0069 808 CDD homeodomain 106 164 IPR001356 GO:0003677
Prci13g0069 808 CDD START_ArGLABRA2_like 317 545 - -
Prci13g0069 808 SUPERFAMILY Bet v1-like 567 794 - -
Prci13g0069 808 ProSiteProfiles 'Homeobox' domain profile. 104 164 IPR001356 GO:0003677
Prci13g0069 808 MobiDBLite consensus disorder prediction 1 114 - -
Prci13g0069 808 FunFam Homeobox-leucine zipper protein GLABRA 2 322 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0069 Prci-Chr13 513273 519614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0069 35 808 Homeobox Transcription Factor Family AT3G61150 67.632 0.0 1034
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci13g0069 START 8.8e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0069 K09338 - jre:108985886 1328.92