Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0038 ATGAGAGTGTTGCAAGATCCTCTTCTTGGCCCAGAATGCAGGGCAATGTTTGAAGATGGAGAAGTAGATGACAGATTCTTGATGATTTTATTCCTGACTGTGGAACGCTTGCGTCATAATTCTTCATGGAAGCCGTACCTTGATATGCTTCCAGCGAATTTTGGAAATCCACTTTGGTTTAGTGATGACGATCTTCAAGAGCTGAGGGGAACAACTTTGTTCCGTGCTACTGAATTGCAGAAGAAAAACCTGCTGTCATTGTACGATACCAAAGTAAAGGCTTTGGTGAAGAAGATCTTGACCCTTAATGGGGATTCAGAGACTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTCTGGAGTCGTGCTTTGAACATCCCTTTTCCTCATTCTTTTGTATTTCCAAAAATGCAAGCACCTGAGAGTTTCATTTCAGTCAATGGACGTGTCAAGACTTTACTTAATGGTGAATATGTTTTCTCAGGAAGCCAGGTTAAAAAATCTGATGATGAAGTTGATGAGATGGCATGTAACACCATGCGAGGAGACCCAGTTTGGGTGGAGGGTCTTGTCCCAGGCATTGACTTTTGCAACCATGATCTGAAGCCAATAGCTACTTGGGAAGTTGACGGAATTGGATCAATCACTCATGTTCCTTCTTCCATGTACCTTCTCTCTGCTGCACAAAATCCCTTGGAGATTGGTCGAGAAATTACCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTCTATCTGTATGGTTTCGTCATCAATGATAACCCAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTGGTTCTATATCTTGCTCAGAATCCAAAAGTCAGCTTCTTGAAGCACAGAAGGCTGAGATGAGATGTCTTTTACCCAAGACTTTGCTGGATCATGGGTTTTTTCCAGTAGGCACCAGAAAAGGTGGGGAAAATGACGAGTGCAAGGTGGACCAAGTTTGCAATTATAGTTGGAGTGGTCAACGGAGGACACCATCTTATGCAAAGAAGCTGGTTTTTCCTGAGAAGTTTATTACAGCCTTGAGGACCATTGCCATGCAGGAGGATGAGATCTTTAAAGTTTCCTTGCTGCTGGAAGAGCTTCTTGGATCTGGAGGGGAGAGACAACTATCGGATACGGATGTTCAATCCGCAGTATGGGAGGTCTGTGGTGATTCTGGAGCCTTCCAGTTGCTTGTTGATCTTCTTCGAGTTAAGTTAATGGATCTTGAAGAGGGCTCTGGAACGGAGGAAAGCGACACAAATTTGCTGAACAAGGCCCTTATTATTGATAGCCGGTATGATAACCAACAGTTGAGGAACAGTTCATGCAACACCGATGAGACTGAGGAGCACAAGTTCATGAGTAGAAACAAATGGTCTTCTATAGTATATCGACGAGGGCAAAAGCAAGCAACTCGCTTATTCTTGAAGGAAGCAGAACACGCTCTGCAATTATCCCTAGATGAAGAAGATAGATAG 1512 0.4319 MRVLQDPLLGPECRAMFEDGEVDDRFLMILFLTVERLRHNSSWKPYLDMLPANFGNPLWFSDDDLQELRGTTLFRATELQKKNLLSLYDTKVKALVKKILTLNGDSETEVCFEDFLWANSVFWSRALNIPFPHSFVFPKMQAPESFISVNGRVKTLLNGEYVFSGSQVKKSDDEVDEMACNTMRGDPVWVEGLVPGIDFCNHDLKPIATWEVDGIGSITHVPSSMYLLSAAQNPLEIGREITISYGNKGNEELLYLYGFVINDNPDDYLMVHYPAEAIGSISCSESKSQLLEAQKAEMRCLLPKTLLDHGFFPVGTRKGGENDECKVDQVCNYSWSGQRRTPSYAKKLVFPEKFITALRTIAMQEDEIFKVSLLLEELLGSGGERQLSDTDVQSAVWEVCGDSGAFQLLVDLLRVKLMDLEEGSGTEESDTNLLNKALIIDSRYDNQQLRNSSCNTDETEEHKFMSRNKWSSIVYRRGQKQATRLFLKEAEHALQLSLDEEDR 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0038 503 Gene3D set domain protein methyltransferase, domain 1 2 260 - -
Prci13g0038 503 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 447 - -
Prci13g0038 503 CDD SET_LSMT 3 260 - -
Prci13g0038 503 Pfam SET domain 26 246 IPR001214 GO:0005515
Prci13g0038 503 SUPERFAMILY SET domain 20 264 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0038 Prci-Chr13 256854 275772 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci13g0038 SET 5.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0038 - - gmx:100777394 739.569