Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0034 ATGGCAGAAGGAGCCAGGCTCGAACGGTTCCTCCAGTGGCTACAGGCGAATGGGGTTCAACTACAAGGTTGCGACATCAAGTATTGTGATTCCCGAAAAGGGTTTGGCATCTTTTCAACTAAAGATGTTTCTGATGGGGTTCTATTGGTTGTTCCGCTAGATTTAGCAATAACTCCAATGAGAGTGTTGCAAGATCCTCTTCTTGGCCCAGAATGCAGGGCAATGTTTGAAGATGGAGAAGTAGATGACAGATTCTTGATGATTTTATTCCTGACTGTGGAACGCTTGCGTCATAATTCTTCATGGAAGCCGTACCTTGATATGCTTCCAGCGAATTTTGGAAATCCACTTTGGTTTAGTGATGACGATCTTCAAGAGCTGAGGGGAACAACTTTGTTCCGTGCTACTGAATTGCAGAAGAAAAACCTGCTGTCATTGTACGATACCAAAGTAAAGGCTTTGGTGAAGAAGATCTTGACCCTTAATGGGGATTCAGAGACTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTCTGGAGTCGTGCTTTGAACATCCCTTTTCCTCATTCTTTTGTATTTCCAAAAATGCAAGCACCTGAGAGTTTCATTTCAGTCAATGGACGTGTCAAGACTTTACTTAATGGTGAATATGTTTTCTCAGGAAGCCAGGTTAAAAAATCTGATGATGAAGTTGATGAGATGGCATGTAACACCATGCGAGGAGACCCAGTTTGGGTGGAGGGTCTTGTCCCAGGCATTGACTTTTGCAACCATGATCTGAAGCCAATAGCTACTTGGGAAGTTGACGGAATTGGATCAATCACTCATGTTCCTTCTTCCATGTACCTTCTCTCTGCTGCACAAAATCCCTTGGAGATTGGTCGAGAAATTACCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTCTATCTGTATGGTTTCGTCATCAATGATAACCCAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTGGTTCTATATCTTGCTCAGAATCCAAAAGTCAGCTTCTTGAAGCACAGAAGGCTGAGATGAGATGTCTTTTACCCAAGACTTTGCTGGATCATGGGTTTTTTCCAGTAGGCACCAGAAAAGGTGGGGAAAATGACGAGTGCAAGGTGGACCAAGTTTGCAATTATAGTTGGAGTGGTCAACGGAGGACACCATCTTATGCAAAGAAGCTGGTTTTTCCTGAGAAGTTTATTACAGCCTTGAGGACCATTGCCATGCAGGAGGATGAGATCTTTAAAGTTTCCTTGCTGCTGGAAGAGCTTCTTGGATCTGGAGGGGAGAGACAACTATCGGATACGGATGTTCAATCCGCAGTATGGGAGGTCTGTGGTGATTCTGGAGCCTTCCAGTTGCTTGTTGATCTTCTTCGAGTTAAGTTAATGGATCTTGAAGAGGGCTCTGGAACGGAGGAAAGCGACACAAATTTGCTGAACAAGGCCCTTATTATTGATAGCCGGTATGATAACCAACAGTTGAGGAACAGTTCATGCAACACCGATGAGACTGAGGAGCACAAGTTCATGAGTAGAAACAAATGGTCTTCTATAGTATATCGACGAGGGCAAAAGCAAGCAACTCGCTTATTCTTGAAGGAAGCAGAACACGCTCTGCAATTATCCCTAGATGAAGAAGATAGATAG 1689 0.4352 MAEGARLERFLQWLQANGVQLQGCDIKYCDSRKGFGIFSTKDVSDGVLLVVPLDLAITPMRVLQDPLLGPECRAMFEDGEVDDRFLMILFLTVERLRHNSSWKPYLDMLPANFGNPLWFSDDDLQELRGTTLFRATELQKKNLLSLYDTKVKALVKKILTLNGDSETEVCFEDFLWANSVFWSRALNIPFPHSFVFPKMQAPESFISVNGRVKTLLNGEYVFSGSQVKKSDDEVDEMACNTMRGDPVWVEGLVPGIDFCNHDLKPIATWEVDGIGSITHVPSSMYLLSAAQNPLEIGREITISYGNKGNEELLYLYGFVINDNPDDYLMVHYPAEAIGSISCSESKSQLLEAQKAEMRCLLPKTLLDHGFFPVGTRKGGENDECKVDQVCNYSWSGQRRTPSYAKKLVFPEKFITALRTIAMQEDEIFKVSLLLEELLGSGGERQLSDTDVQSAVWEVCGDSGAFQLLVDLLRVKLMDLEEGSGTEESDTNLLNKALIIDSRYDNQQLRNSSCNTDETEEHKFMSRNKWSSIVYRRGQKQATRLFLKEAEHALQLSLDEEDR 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0034 562 CDD SET_LSMT 30 319 - -
Prci13g0034 562 Gene3D set domain protein methyltransferase, domain 1 4 319 - -
Prci13g0034 562 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 506 - -
Prci13g0034 562 Pfam SET domain 34 305 IPR001214 GO:0005515
Prci13g0034 562 SUPERFAMILY SET domain 6 323 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0034 Prci-Chr13 256854 275798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0034 1 192 NAC Transcription Factor Family AT3G56570 28.718 7.01e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci13g0034 SET 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0034 - - gmx:100777394 829.706