Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0033 ATGGCAGAAGGAGCCAGGCTCGAACGGTTCCTCCAGTGGCTACAGGCGAATGGGGTTCAACTACAAGGTTGCGACATCAAGTATTGTGATTCCCGAAAAGGGTTTGGCATCTTTTCAACTAAAGATGTTTCTGATGGGGTTCTATTGGTTGTTCCGCTAGATTTAGCAATAACTCCAATGAGAGTGTTGCAAGATCCTCTTCTTGGCCCAGAATGCAGGGCAATGTTTGAAGATGGAGAAGTAGATGACAGATTCTTGATGATTTTATTCCTGACTGTGGAACGCTTGCGTCATAATTCTTCATGGAAGCCGTACCTTGATATGCTTCCAGCGAATTTTGGAAATCCACTTTGGTTTAGTGATGACGATCTTCAAGAGCTGAGGGGAACAACTTTGTTCCGTGCTACTGAATTGCAGAAGAAAAACCTGCTGTCATTGTACGATACCAAAGTAAAGGCTTTGGTGAAGAAGATCTTGACCCTTAATGGGGATTCAGAGACTGAGGTGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTCTGGAGTCGTGCTTTGAACATCCCTTTTCCTCATTCTTTTGTATTTCCAAAAATGCAAGCACCTGAGAGTTTCATTTCAGTCAATGGACGTGTCAAGACTTTACTTAATGTTTTCTCAGGAAGCCAGGTTAAAAAATCTGATGATGAAGTTGATGAGATGGCATGTAACACCATGCGAGGAGACCCAGTTTGGGTGGAGGGTCTTGTCCCAGGCATTGACTTTTGCAACCATGATCTGAAGCCAATAGCTACTTGGGAAGTTGACGGAATTGGATCAATCACTCATGTTCCTTCTTCCATGTACCTTCTCTCTGCTGCACAAAATCCCTTGGAGATTGGTCGAGAAATTACCATTAGTTATGGCAACAAAGGAAATGAGGAACTTCTCTATCTGTATGGTTTCGTCATCAATGATAACCCAGATGACTATCTCATGGTCCACTATCCAGCAGAAGCAATTGGTTCTATATCTTGCTCAGAATCCAAAAGTCAGCTTCTTGAAGCACAGAAGGCTGAGATGAGATGTCTTTTACCCAAGACTTTGCTGGATCATGGGTTTTTTCCAGTAGGCACCAGAAAAGGTGGGGAAAATGACGAGTGCAAGGTGGACCAAGTTTGCAATTATAGTTGGAGTGGTCAACGGAGGACACCATCTTATGCAAAGAAGCTGGTTTTTCCTGAGAAGTTTATTACAGCCTTGAGGACCATTGCCATGCAGGAGGATGAGATCTTTAAAGTTTCCTTGCTGCTGGAAGAGCTTCTTGGATCTGGAGGGGAGAGACAACTATCGGATACGGATGTTCAATCCGCAGTATGGGAGGTCTGTGGTGATTCTGGAGCCTTCCAGTTGCTTGTTGATCTTCTTCGAGTTAAGTTAATGGATCTTGAAGAGGGCTCTGGAACGGAGGAAAGCGACACAAATTTGCTGAACAAGGCCCTTATTATTGATAGCCGGTATGATAACCAACAGTTGAGGAACAGTTCATGCAACACCGATGAGACTGAGGAGCACAAGTTCATGAGTAGAAACAAATGGTCTTCTATAGTATATCGACGAGGGCAAAAGCAAGCAACTCGCTTATTCTTGAAGGAAGCAGAACACGCTCTGCAATTATCCCTAGATGAAGAAGATAGATAG 1680 0.4357 MAEGARLERFLQWLQANGVQLQGCDIKYCDSRKGFGIFSTKDVSDGVLLVVPLDLAITPMRVLQDPLLGPECRAMFEDGEVDDRFLMILFLTVERLRHNSSWKPYLDMLPANFGNPLWFSDDDLQELRGTTLFRATELQKKNLLSLYDTKVKALVKKILTLNGDSETEVCFEDFLWANSVFWSRALNIPFPHSFVFPKMQAPESFISVNGRVKTLLNVFSGSQVKKSDDEVDEMACNTMRGDPVWVEGLVPGIDFCNHDLKPIATWEVDGIGSITHVPSSMYLLSAAQNPLEIGREITISYGNKGNEELLYLYGFVINDNPDDYLMVHYPAEAIGSISCSESKSQLLEAQKAEMRCLLPKTLLDHGFFPVGTRKGGENDECKVDQVCNYSWSGQRRTPSYAKKLVFPEKFITALRTIAMQEDEIFKVSLLLEELLGSGGERQLSDTDVQSAVWEVCGDSGAFQLLVDLLRVKLMDLEEGSGTEESDTNLLNKALIIDSRYDNQQLRNSSCNTDETEEHKFMSRNKWSSIVYRRGQKQATRLFLKEAEHALQLSLDEEDR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0033 559 SUPERFAMILY SET domain 6 320 IPR046341 -
Prci13g0033 559 CDD SET_LSMT 30 316 - -
Prci13g0033 559 Gene3D set domain protein methyltransferase, domain 1 4 316 - -
Prci13g0033 559 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 6 503 - -
Prci13g0033 559 Pfam SET domain 34 302 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0033 Prci-Chr13 256854 275798 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0033 1 192 NAC Transcription Factor Family AT3G56570 28.718 6.60e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci13g0033 SET 1.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0033 - - gmx:100777394 830.861