Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0023 ATGTTGGGCTCAAACACCAATTTGGTGACCACGGTGATTGGATTTGGTATGAGCGCGACTTTTATTGTGTTTGTCTGTTCAAGAATAATCTGTGGAAGGTTGCGAGGGTCCTCGGAATCTCATAATATGTTTGAATTTGAGCCTAGGATGGATATAGAACGGCCAGAACATCATGTTAACCATCCAGAACCTGCTCTTGTTACTGCAATTCCCACCATGAAGTTCAACCAAGAGGCTTTCAGTTCTATTGAAGATACACAGTGTGTGATTTGTTTGGCAGAGTACAAAGAAAGAGAGGTATTGCGCATCATGCCAAAATGTGGTCATAGCTTCCATCTTTCCTGCATTGATATATGGTTGAGGAAACAATCCACCTGCCCAGTATGCCGTCTTCCATTGCAGAATTCTTCTGAAACAAAGCATGTGAGACCGGTAACGTTTAGCTTAGGGCAAAGCGAGGCTCAGACTTCTGAAAGTAGGGACAGTGAGAGGAATGCTGAGCCTGTGCCAGGGAATGCCTTGCCCTTACAGTCAGACACTGCAGAAGCAGAAACAAGGCAATGA 564 0.4468 MLGSNTNLVTTVIGFGMSATFIVFVCSRIICGRLRGSSESHNMFEFEPRMDIERPEHHVNHPEPALVTAIPTMKFNQEAFSSIEDTQCVICLAEYKEREVLRIMPKCGHSFHLSCIDIWLRKQSTCPVCRLPLQNSSETKHVRPVTFSLGQSEAQTSESRDSERNAEPVPGNALPLQSDTAEAETRQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0023 187 MobiDBLite consensus disorder prediction 140 187 - -
Prci13g0023 187 MobiDBLite consensus disorder prediction 140 156 - -
Prci13g0023 187 Pfam Ring finger domain 87 130 IPR001841 -
Prci13g0023 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 140 IPR013083 -
Prci13g0023 187 PANTHER OS11G0150450 PROTEIN 1 165 - -
Prci13g0023 187 CDD RING-H2_EL5-like 87 130 - -
Prci13g0023 187 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Prci13g0023 187 FunFam Putative RING zinc finger domain superfamily protein 64 136 - -
Prci13g0023 187 SMART ring_2 88 129 IPR001841 -
Prci13g0023 187 SUPERFAMILY RING/U-box 78 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0023 Prci-Chr13 224161 226328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0023 59 133 C3H Transcription Factor Family AT4G33565 39.286 1.15e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0023 - - gmx:100790202 279.256