Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0018 ATGGTGGTTGAAGATACTAATCATGATGAGGGTCGTTCAACCGAAGAATGGTTGTTTGAAGCACAAGAGCTGGTCCCTCTAGCTCTTGCCAAGGCCAAGGAGGTGAGGAATTTCCCGGGAAGGTGGAAGATGATCGTATCAAAACTCGAACAGATCCCATGTCGTTTATCAGACTTATCCAGCCACCCATGCTTCTCCAAGAACGCTCTCTGCAAGGAGCAATTGCAGGCCGTATCATCAATACTTAGAGATGCCGTTCATTTGGCCGAGCTTTGCATGAAGGACAAGTACGAAGGCAAGCTCAAGATGCAGAGCGATCTCGACGCCTTGTCGGGAAAACTCGATCTACACTTGAAAGATTGCAGCCTGCTGATCAAAACTGGAGTTCTCGGGGAGGCCACCCTGCCATTAGCCATATCAGAAGCTGATGTTTCGAGCAATAATATCAGGGAGCTACTGGCTCGCCTGCAGATCGGTCACTTGGAGTCGAAGCACAGGGCTATAGAGAAACTGCATGACGTGATGAAGGAAGACGAGAAGAGTGTTTTGGCTGTTTTAACTCGCAGCAACATAGCTGCCTTGGTTCAATTGCTCACCGCTACTTCTCCGAGGACAAGAGAGAAAACTGTTACCATTATATGCAGCCTTGCGGAATCGGGAAGCTGCGAGAATTGGCTGGCCTCTGAAGGAGTCATTCCACCTCTGATAAGGCTCATCGAATCAGGAAGTGCCGTCGGGAAAGAGAAGGCTACCGTAACCTTCCAGAGGCTCTCCATGTCATCAGAAACTGCTCGTGCCATTGTTGGACATGGCGGGGTTCGTCCGCTCATTGATCTCTGCCAGACTGGGGATTCTGTGTCACAGGCTGCTTGTGCTTGTGCTTTGAAGAACATATCCTCCGTCCCGGAGGTTCGACAGGTTCTGGCTGAGGAAGGGATTGTCAAGGTAATGATCAGTCTCCTGAACTGTGGAATGTTGTTGAATTCCAAAGAGTACGCGGCTGAGTGCCTACAGAATCTCACTTGCAGCAACGAGAATCTAAGGAGGCTGGTGATATCAGAAAATGGAATAGGAAGCCTTCTAGCGTATCTGGATGTTCCTCTTCCGCAAGAATCTTCAATGGGAGCCCTGAGGAACTTAGTAGGATCCGTGTCCGAGCAGTCTCTAGTTTCTATGGGCCTGCTTCCCCGCTTGGCTCACGTCTTGAAATGCGGGTCCGTGGGGGCACAACAGGCGGCTGCTTCTACGGTCTGTAAAATTTGCAGCTCAGGAGAGATGAAGAAGATGATTGGGGAGGCTGGGTGCGTGCCCCTGCTGGTGAAAATGCTGGAGTCCAAGTCTAATAGTGCTAGGGACGTCGCAGCGCAAGCAATTTCGAGCTTGATGATGCTGTCTCAGAATCAAAGAGAGGTGAAGAGGAATGACAAGAGTGTGCCTAATCTTGTTCAGCTGCTCGATCCAAATCCTCAAAATTCTGCAAAGAAATATGCTGTGGCATGCCTGGGATCGCTTTCTTCGAGTCAGAAGTGTAGGAAACTGATGATCTCCTACGGAGCAATCGGGTATCTGAAGAAGCTCGCCGAGATGGAGATTCCGGGAGCCAAGAAGCTACTTGAGAGATTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGCAGGAGATAG 1662 0.4976 MVVEDTNHDEGRSTEEWLFEAQELVPLALAKAKEVRNFPGRWKMIVSKLEQIPCRLSDLSSHPCFSKNALCKEQLQAVSSILRDAVHLAELCMKDKYEGKLKMQSDLDALSGKLDLHLKDCSLLIKTGVLGEATLPLAISEADVSSNNIRELLARLQIGHLESKHRAIEKLHDVMKEDEKSVLAVLTRSNIAALVQLLTATSPRTREKTVTIICSLAESGSCENWLASEGVIPPLIRLIESGSAVGKEKATVTFQRLSMSSETARAIVGHGGVRPLIDLCQTGDSVSQAACACALKNISSVPEVRQVLAEEGIVKVMISLLNCGMLLNSKEYAAECLQNLTCSNENLRRLVISENGIGSLLAYLDVPLPQESSMGALRNLVGSVSEQSLVSMGLLPRLAHVLKCGSVGAQQAAASTVCKICSSGEMKKMIGEAGCVPLLVKMLESKSNSARDVAAQAISSLMMLSQNQREVKRNDKSVPNLVQLLDPNPQNSAKKYAVACLGSLSSSQKCRKLMISYGAIGYLKKLAEMEIPGAKKLLERLERGKLRSLFSRR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0018 553 Gene3D - 387 540 IPR011989 -
Prci13g0018 553 Gene3D - 137 386 IPR011989 -
Prci13g0018 553 SMART arm_5 465 506 IPR000225 GO:0005515
Prci13g0018 553 SMART arm_5 423 463 IPR000225 GO:0005515
Prci13g0018 553 SMART arm_5 260 300 IPR000225 GO:0005515
Prci13g0018 553 SMART arm_5 382 422 IPR000225 GO:0005515
Prci13g0018 553 SMART arm_5 178 218 IPR000225 GO:0005515
Prci13g0018 553 SMART arm_5 301 342 IPR000225 GO:0005515
Prci13g0018 553 SUPERFAMILY ARM repeat 149 532 IPR016024 -
Prci13g0018 553 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 434 470 IPR000225 GO:0005515
Prci13g0018 553 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 551 - -
Prci13g0018 553 Pfam Armadillo/beta-catenin-like repeat 425 461 IPR000225 GO:0005515
Prci13g0018 553 Pfam Armadillo/beta-catenin-like repeat 261 300 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0018 Prci-Chr13 189839 192225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0018 298 529 U-box Gene Family AT2G23140 28.870 1.02e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0018 - - gmx:100809488 857.055