Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1395g0001 ATGCACACCTCCGCCACCAGAAGAAAAACGCGTCCAAGGCTCCTCAGAATCATACTCACTGATCCCGACGCCACCGGTTCTGACTCCGATTCTTCCGCCGATGAAAGCCCGCACGCGTCTTCGAGAGTCAAGCGCCACATCACGCAGATCACCCTCCACTTACCGTCCCCAAATCCTCCTCCTTCCCCCGCTCCCCCCGGCTCCCCTGCCAAATCCAACCCGACCCGGTTCAGAAGACCCGCTGGCGCTTCCTCCTCGCTCCGCCACAGGAGGTTCAGGGGCGTTCGCCAGAGGCCGTGGGGTCGGTGGGCTGCCGAGATCCGGGATCCGAACCGAAGGAAACGGGTCTGGCTTGGGACGTTCGACACGGCGGAGGAGGCCGCCTCGGAGTACGACAGGGCAGCGCTAAAGCAGGGTCCTCACGCGGTTACCAACTTCCCTAACTCTATCATTGTAGAGGATAAGGCGACGCCGATCGCCGCCGCGGATGAAAGTATTGGCACAGAAGGAACGGTATCGTACTCTGAATCGGCGGCGTCGCCCACGTCTGTCCCCTACGATGGCGATTCGTCGGCGTTCAACGATTTCCGTTACGGCGGAGTGGATGCGTTCGGATTCGACATAGACGTGCCGCTGACCCTGCCGGACGCGAACGTGATGCTGTCGAGTCAACCGTTTGGAAAAGAGGAGTTCGGCGAGTTTGACCTCGACGACTTCTTGACGTGGCCCAACTAA 735 0.6068 MHTSATRRKTRPRLLRIILTDPDATGSDSDSSADESPHASSRVKRHITQITLHLPSPNPPPSPAPPGSPAKSNPTRFRRPAGASSSLRHRRFRGVRQRPWGRWAAEIRDPNRRKRVWLGTFDTAEEAASEYDRAALKLXGPHAVTNFPNSIIVEDKATPIAAADESIGTEGTVSYSESAASPTSVXPYDGDSSAFNDFRYGGVDAFGFDIDVPLTLPDANVMLSSQPFGKEEFGEFDLDDFLTWPN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1395g0001 246 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Prci1395g0001 246 PRINTS Ethylene responsive element binding protein signature 114 130 IPR001471 GO:0003700|GO:0006355
Prci1395g0001 246 SMART rav1_2 91 154 IPR001471 GO:0003700|GO:0006355
Prci1395g0001 246 Gene3D AP2/ERF domain 90 150 IPR036955 GO:0003700|GO:0006355
Prci1395g0001 246 ProSiteProfiles AP2/ERF domain profile. 91 148 IPR001471 GO:0003700|GO:0006355
Prci1395g0001 246 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 11 164 - -
Prci1395g0001 246 CDD AP2 91 150 IPR001471 GO:0003700|GO:0006355
Prci1395g0001 246 MobiDBLite consensus disorder prediction 1 93 - -
Prci1395g0001 246 Pfam AP2 domain 91 140 IPR001471 GO:0003700|GO:0006355
Prci1395g0001 246 MobiDBLite consensus disorder prediction 54 70 - -
Prci1395g0001 246 FunFam Ethylene-responsive transcription factor 2 90 149 - -
Prci1395g0001 246 SUPERFAMILY DNA-binding domain 91 150 IPR016177 GO:0003677
Prci1395g0001 246 PIRSF PTI6 1 246 IPR017392 GO:0003700
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1395g0001 4 188 AP2-EREBP Transcription Factor Family AT4G27950 41.872 2.97e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci1395g0001 AP2 3.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1395g0001 K13434 - qsa:O6P43_020468 238.81