Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1391g0002 ATGAAGGAGATGATGTACAAGATCGCCGCTTTGCAGCCAGTCGAGATCGATCCCTCCACCATCCGGAAACCTAAGCGGCGGAACGTCCGGATCAGTGACGACCCACAGAGTGTCGCAGCCCGACACCGCCGTGAGAGGATCAGCGAGAAAATCCGAATCCTGCAGAGACTCGTCCCCGGAGGAATCAAGCTCGACACCGCCTCCATGCTCGACGAAGCCATTCGCTACGTCAAATTCTTGAAGAGACAAATCAGGTTGCTCCAATCTCCACCACACCAACACTGCACGATCACCACCGGTAACAACACCTCTCTCGCCGATTGGCCTTACACACCAAACACGCCCCACACCGCCGCCACCGGAACGGTGTTCAACGCCGGTGATAGCTCCTCCGGGTTTAACCATGAGGTAATTAGTGAATGA 423 0.5579 MKEMMYKIAALQPVEIDPSTIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGIKLDTASMLDEAIRYVKFLKRQIRLLQSPPHQHCTITTGNNTSLADWPYTPNTPHTAATGTVFNAGDSSSGFNHEVISE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1391g0002 140 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 92 IPR036638 GO:0046983
Prci1391g0002 140 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 80 IPR011598 GO:0046983
Prci1391g0002 140 Pfam Helix-loop-helix DNA-binding domain 41 80 IPR011598 GO:0046983
Prci1391g0002 140 Gene3D - 34 97 IPR036638 GO:0046983
Prci1391g0002 140 CDD bHLH_AtIND_like 32 89 - -
Prci1391g0002 140 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 122 IPR045843 GO:0003700|GO:0006355
Prci1391g0002 140 FunFam BHLH transcription factor 34 96 - -
Prci1391g0002 140 SMART finulus 37 86 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1391g0002 1 108 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 67.593 1.12e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci1391g0002 HLH 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1391g0002 - - pcin:129300028 283.493