Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1387g0003 ATGAACACTATTTGCTGCTTGCTCTTCTTATTACTATTCCTTGTTCCTCAGTCCTCGTTCTCTCTCTCTTCCGATGGGCTTGCCCTTCTGTCTCTCAAATCTGCCATCGATCGACCTCCTGGAGCCTCCGCTTTCCCCGACTGGAACGATGGTGATTCCACTCCTTGTCAATGGTCTGGCATCTCCTGTATGAACGTCTCTGGTTCCTCGGAGCCTCGCGTCGTTGGAATCGCGCTTTCTGGGAAGAATCTCCGGGGCTATATTCCTTCTGAGCTCGGAAGCTTGGCATATCTTCGCAGGCTCAATTTGCATAGCAACAATTTCTACGGTTTTATTCCTGTTCAGCTCTTCAATGCCACTTCACTGCACAGTCTTTTTCTCTACGGTAACAACCTCTCCGGTCCTTTACCTCCCTCGATCTGCAACATCCCGCGGCTTCAAAACGTCGATCTCTCCAATAACTCCATCTCTGGTAATATCCCTGGGGACCTTAAGAAGTGCAAGCAGTTGCAGAGACTGATTCTCGCTCGGAACAAGTTTTCAGGGGAGGTACCTAAAGGTGTGTGGTCGGAATTGGATAATTTGGTTCAGTTGGACCTTTCTGCGAACGAGCTGGACGGGTCGATTCCTGACGATATTGGCCAACTGAAAACTCTGTCGGGTACTCTCAATCTTTCTTTTAATCACTTGTCTGGCAGGATTCCGAAGTCGTTGGGGAATTTGCCAGTTACAGTGAGTTTTGATCTTCGGAATAACAATCTAAGTGGCGAGATACCCCAAACGGGGTCGTTTGCTAACCAGGGTCCTACCGCCTTTCTGAACAATCCGCAGCTCTGTGGATTTCCCCTCCAGAAATCTTGCGGTAATTCCAACCAGGGTTCCTCGGGAACTCCAAGTCCATCTCGGGAGTCTGGAAACCGTCCGGCGAATGGCCTTAGTCCTGGTTTGATCATACTAATTTCAGCGGCTGACGCAGCTGGGGTTGCGTTAATTGGCCTTGTAGTTGTGTACATTTATTGGAAAAAGAAGGACAATTCCAATGGATGTAGCTGCACAGGGAAGAGCAAGTTTGGCGGGAATGAGAAAGGGCATATTTGTTCCTTCCCGTGCATCAATGGTCTCAAAAGTGATGACTCTGAAATAGAGGAACCTGAAAAGGCAGAGGATAGCAAAGGGGAAGGGGATTTGGTGGCCATTGATAAAGGTTTTAACTTCGAGCTTGATGAACTTCTCCGGGCTTCGGCTTATGTTTTGGGAAAGAGTGGATTGGGGATTGTGTACAAAGTGGTTCTGGGAAATGGGATTCCTGTGGCTGTGAGAAGACTCGGAGAGGGCGGTGAACAGAGGTACAAGGAGTTTGCGGCTGAGGTTCAGGCCATTGGGAAAGTGAAGCACCCTAACATTGTGAAGTTGAGGGCTTATTATTGGGCTCCAGACGAAAAGCTTCTGATCAGTGATTTCATCTCCAATGGCAATTTGGCCAATGCTCTTCGCGGTAGAAATGGTCAACCTTCTCCGAATCTTTCATGGTCAACCAGGCTGAGAATTGCCAAAGGAACTGCTAGGGGATTGGCCTATCTCCATGAATGCAGTCCAAGAAAGTTCGTCCATGGTGACGTAAAACCCTCAAACATCCTGCTTGACAACGACTTCCACCCTTATATCTCTGACTTTGGCCTCAACCGCCTCATCACCATAACTGGAAACAACCCTTCCTCTGGGGGCTTCATGGGCGGAGCTATTCCATACATGAAACCATCCCAAACAGAGCGAACCAACAATTACAAAGCCCCTGAAGCTAGAGTCCCTGGCTGCAGGCCGGCCCAGAAATGGGACGTCTATTCATTTGGAGTTGTATTGCTTGAACTTCTTACTGGGAAATCTCCAGAGTCATCTCCCACAACGTCAACTTCCATGGAAGTTCCTGACTTAGTGAGGTGGGTGAAGAAAGGGTTTGAAGAAGAAAGTCCATTATCAGAAATGGTTGATCCATCGCTGCTCCAAGAAGTGCATGTCAAGAAAGAGGTTCTGGCTGTATTTCATGTAGCACTAGCTTGCACTGAGGGAGACCCTGAGGTTCGGCCTAGAATGAAATCTGTCTCTGAAAATCTTGAAAGGATCGGAACATGA 2130 0.4822 MNTICCLLFLLLFLVPQSSFSLSSDGLALLSLKSAIDRPPGASAFPDWNDGDSTPCQWSGISCMNVSGSSEPRVVGIALSGKNLRGYIPSELGSLAYLRRLNLHSNNFYGFIPVQLFNATSLHSLFLYGNNLSGPLPPSICNIPRLQNVDLSNNSISGNIPGDLKKCKQLQRLILARNKFSGEVPKGVWSELDNLVQLDLSANELDGSIPDDIGQLKTLSGTLNLSFNHLSGRIPKSLGNLPVTVSFDLRNNNLSGEIPQTGSFANQGPTAFLNNPQLCGFPLQKSCGNSNQGSSGTPSPSRESGNRPANGLSPGLIILISAADAAGVALIGLVVVYIYWKKKDNSNGCSCTGKSKFGGNEKGHICSFPCINGLKSDDSEIEEPEKAEDSKGEGDLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLRAYYWAPDEKLLISDFISNGNLANALRGRNGQPSPNLSWSTRLRIAKGTARGLAYLHECSPRKFVHGDVKPSNILLDNDFHPYISDFGLNRLITITGNNPSSGGFMGGAIPYMKPSQTERTNNYKAPEARVPGCRPAQKWDVYSFGVVLLELLTGKSPESSPTTSTSMEVPDLVRWVKKGFEEESPLSEMVDPSLLQEVHVKKEVLAVFHVALACTEGDPEVRPRMKSVSENLERIGT 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1387g0003 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 167 707 IPR046959 -
Prci1387g0003 709 FunFam Leucine-rich repeat receptor-like protein kinase 22 186 - -
Prci1387g0003 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Prci1387g0003 709 Gene3D Transferase(Phosphotransferase) domain 1 488 709 - -
Prci1387g0003 709 MobiDBLite consensus disorder prediction 287 308 - -
Prci1387g0003 709 Gene3D Phosphorylase Kinase; domain 1 400 487 - -
Prci1387g0003 709 Pfam Protein kinase domain 417 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1387g0003 709 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Prci1387g0003 709 Pfam Leucine rich repeat 144 205 IPR001611 GO:0005515
Prci1387g0003 709 SUPERFAMILY Protein kinase-like (PK-like) 417 704 IPR011009 -
Prci1387g0003 709 SMART serkin_6 416 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1387g0003 709 ProSiteProfiles Protein kinase domain profile. 412 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1387g0003 709 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Prci1387g0003 709 Gene3D Ribonuclease Inhibitor 191 289 IPR032675 -
Prci1387g0003 709 SUPERFAMILY L domain-like 22 284 - -
Prci1387g0003 709 Gene3D Ribonuclease Inhibitor 21 190 IPR032675 -
Prci1387g0003 709 CDD STKc_IRAK 418 707 - -
Prci1387g0003 709 FunFam Os07g0541700 protein 495 574 - -
Prci1387g0003 709 FunFam Leucine-rich repeat receptor-like protein kinase 395 487 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1387g0003 19 707 Receptor kinase-like Gene Family AT1G67510 72.946 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci1387g0003 Pkinase 3.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1387g0003 - - qsa:O6P43_023877 1177.16