Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1380g0006 ATGGGATCGCTGGAGACACCGACGAGGGTAGAGAACGGTTCTGCCCCGTTAACCGGCACCGGTAAAATTTCTTCTGGCGATGGGGAGCCTGTCGAAACTGCGTCGGAGAAGCCGCTGGAATCCGATACTCCAAAGAAGGGGAGAGCGTCTTTGCCTCCCCTGGATGTTGGCACTCGGGTCATGTGTCGTAAGAGGGACGGCAAGCTTCAACCCGTGAAAGTCATCGAGCGCCGCAAGATGAGTAAAGTGCGTCCCATCGATTACGACTGTTACGTCCATTATACCGAGTTCAATAGGAGGCTTGATGAGTGGGTGAAGGTTGAACAACTTGATCTTGATTTGGTGGAGGCTGTTGACGAAAAGTTGAAGGTGACAAGCTTGGAGATGACACGCCAGCAAAAGAGGAGGATTGATGAGACACACCGTGGAGGGCCATGA 438 0.5297 MGSLETPTRVENGSAPLTGTGKISSGDGEPVETASEKPLESDTPKKGRASLPPLDVGTRVMCRKRDGKLQPVKVIERRKMSKVRPIDYDCYVHYTEFNRRLDEWVKVEQLDLDLVEAVDEKLKVTSLEMTRQQKRRIDETHRGGP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1380g0006 145 MobiDBLite consensus disorder prediction 1 21 - -
Prci1380g0006 145 Pfam RNA binding activity-knot of a chromodomain 54 112 IPR025995 -
Prci1380g0006 145 SUPERFAMILY Chromo domain-like 46 140 IPR016197 -
Prci1380g0006 145 Gene3D - 42 143 - -
Prci1380g0006 145 MobiDBLite consensus disorder prediction 1 56 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1380g0006 4 144 C2H2 Transcription Factor Family AT5G64610 55.556 8.36e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1380g0006 K11308 - pcin:129303555 245.358