Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1376g0001 ATGGAAACGGATGCCTCTAGTCAAGAGGACAGCCTTGATAATCTCAGTGATGATATAATTGAAATCTTGGATGAGACACCTCCAAACGAAAAGGCCAGGAAGGCAATTTCAAGGAACAGGACTTCAGAAATCAACCAAAGCAAAATTGAAATTTCTGAGCAAATATCTGAAGAAGACACCATGGGAACAAGAATTTTCAACAAAGTTAAATGTGTGAATTCTGAGCATAGACAGAAAAACGTATTAGCTGCCGTGGAAAAGAACAGAGCTTTGGATGTTGCCAGATCTTTCAAATATGATAATCCCTTTTTCACGTTAGTCATGCAGCGTTCATATATCGGTTCTGGTTGTTACTTGTCAATGCCAAAAGACTTTGCTGCAAAACATTTGAAGGAAGAATGTGTTGTGCAACTTCAGACCTTGGATGGCAGAACTTGGCCTGCTAAGTTTAAAGTTCCTAAAATTGGAGAAGGCTGGAGGAAGTTTGTGAAGGAAAATGGTTTGAAAGTGGGGGATGTTTGTGTATTTGAAATCATTGATCTCTCATTCAAAGTACATATTTTTAGAGATGCTGAAAAAGGAGATCTGAAAGTTAATGCTTTTGAAAAGGAGCAGAGCAGCTGTATGCAAGATCCACCTCTTGAAAGGAGAGCTCTTCCATATCTGAAAATCCTCGTTTTGTGGCTTTGA 690 0.3884 METDASSQEDSLDNLSDDIIEILDETPPNEKARKAISRNRTSEINQSKIEISEQISEEDTMGTRIFNKVKCVNSEHRQKNVLAAVEKNRALDVARSFKYDNPFFTLVMQRSYIGSGCYLSMPKDFAAKHLKEECVVQLQTLDGRTWPAKFKVPKIGEGWRKFVKENGLKVGDVCVFEIIDLSFKVHIFRDAEKGDLKVNAFEKEQSSCMQDPPLERRALPYLKILVLWL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1376g0001 229 Gene3D - 82 193 IPR015300 -
Prci1376g0001 229 SUPERFAMILY DNA-binding pseudobarrel domain 100 188 IPR015300 -
Prci1376g0001 229 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 55 192 IPR044837 -
Prci1376g0001 229 ProSiteProfiles B3 DNA-binding domain profile. 104 191 IPR003340 GO:0003677
Prci1376g0001 229 CDD B3_DNA 102 189 IPR003340 GO:0003677
Prci1376g0001 229 SMART B3_2 104 192 IPR003340 GO:0003677
Prci1376g0001 229 Pfam B3 DNA binding domain 104 189 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1376g0001 53 189 REM Transcription Factor Family AT1G49480 33.103 5.36e-20 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci1376g0001 B3 7.4e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1376g0001 - - pcin:129299996 444.506