Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1373g0002 ATGTGTGAATTCGTTCAAACTATCATAAGTTTCTGCGAATCTGTGGTTATGTGCTGTTCCGAATGGGGAATGTGGAATCCCTGGATTGGATCGGTACCCAATTTAGAGGAATTAAACTACAATGTTATTGGCCCGGTTACAGACTGTACGTTGAACAAGGTTTACCGTTGTGTTAAAGCTGATGTCGATCAATCGATGGTATTCATCAAGGAGATTTTCATGCCTGACGGATATAATACAGCTGTTCAGACATCGATAAGTGCTAAAACGAGTTTTTTTCGATTCCACGGTCATCCAAACATTATAAGGGAGCTGCGTTCATTCAGGAGGGGGAATTACATGTATATTGTTTATGAGTATTTTTCCGTTGATCTTTCCAATTTCATTTCGTTTCCAAAGATCCAGAGAGATCCGCAGACAAGATTGATTCTTCAGCAGATACTCTCTGCCGTAAAACATTGTCATTCTTATGACATTATCCTCGGGGATATAAAACCAAAGTACATACAAATTAATTTCACTGCTCGTTTAATCAAGCTAGCTGACTTCGGTTTCGCCGGCGCATATGGAGATCCCTGGGCATCTTATCCTATAAAACCCTCCCAATACAGTGCTCCTGAACTCCTGTTTAGAACTCGTCAACATTCAAAGGCAGCTGATATGTGGTCTGTCGGCTGTATATTTGGAGAGCTGGTAATTGGGAAACCTGTATTCCAGGGCACAACTACAAGGGAACAATTGGTGTCAATTTTTCGGTAA 759 0.4097 MCEFVQTIISFCESVVMCCSEWGMWNPWIGSVPNLEELNYNVIGPVTDCTLNKVYRCVKADVDQSMVFIKEIFMPDGYNTAVQTSISAKTSFFRFHGHPNIIRELRSFRRGNYMYIVYEYFSVDLSNFISFPKIQRDPQTRLILQQILSAVKHCHSYDIILGDIKPKYIQINFTARLIKLADFGFAGAYGDPWASYPIKPSQYSAPELLFRTRQHSKAADMWSVGCIFGELVIGKPVFQGTTTREQLVSIFR 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1373g0002 252 SMART serkin_6 40 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1373g0002 252 SUPERFAMILY Protein kinase-like (PK-like) 39 252 IPR011009 -
Prci1373g0002 252 Gene3D Phosphorylase Kinase; domain 1 39 120 - -
Prci1373g0002 252 Pfam Protein kinase domain 52 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1373g0002 252 PANTHER CELL DIVISION PROTEIN KINASE 40 251 - -
Prci1373g0002 252 Gene3D Transferase(Phosphotransferase) domain 1 121 252 - -
Prci1373g0002 252 ProSiteProfiles Protein kinase domain profile. 40 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1373g0002 39 252 Core Cell Cycle Gene Families AT3G48750 30.275 6.72e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci1373g0002 Pkinase 2.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1373g0002 K02206 K02088 mof:131143523 149.828