Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1373g0001 ATGGTTTTGAGACGCCAAAACGAAGGAAGGATTAACGAAGGAATGAACCAACGTGAAGCAGTTACTTCTATCCGTTTCTGCCGGGAAATGCTGTTTTATAAGCTTCCAACGATCACTTTCAAGAATCGCATTCGCTCTCTTCACTCTTTTCCTTCCAGTGCTCTATATTCTCTCCTCACTGATCTCTTCTCGGTTCTGATTCTCACAAAAATGAGCGGTATCCTTGAACAGACCAATGTATTCAAATCTCTGTTCGTGGGCTGTTTAGAATGCAGAGTTTGGTATCGTCGTTGGAGAAGTTCTAAAGCAGATCTGAATTTAGATCAGTTCAACATCAGGGTCATTGAACCAGTAGGATTCGGTCCGTTCAGGAAGGTTTACCGGTGTCACGATGTAAACAGTAATCGAGTTGTGGCAGTTAAGGAGGTTTACGCTGGTGACGGTAGTGAAACAGAAATGATAAATGAAAGAATCGAGTTTCTTAAAGATCAGCCGCATAACAACGTGGTCAGGTTGCTGTATACATTGAAAAGGGGATGTTACCTCTATCTCGTTTTTGAGTATATCACCCCTAATCTGTACTATTTCATTAACCTATCAGAAGACCTTAGATATCCAAAACAAAGAAATTATATGTTGTATCAGATGCTTGCGGCTGTAGCACACTATCATTCTAACGGGATTCTCCTCCGAGATCTGAAACCACAAAATCTACTCATGGATTTTCGTGATGGTTTCCTCAAGCTATGTGATTTCGGTTTGTACAGTTCATTCGGAGATCCTGAACCTTGTGATATACCAGTGTCCTTGTATACTGCGCCTGAGGTCTTGCTTGATAACAATGAACATTCACGGCCATCTGATCTGTGGGCCGTGGGTTGTATTTTTGGAGAGATAGTAATCAAGAAGCCTCTATTTCATATTGGTAAAAGCAATCAGGATCAGCTAAGGGGCATTTTCGGTTTGTTAGGAACTCCAACTGAGGAATCTTGGCCGGGAATTAGTGACCTGTGCCCTACACTTGCCTTCTACCCCAAGTTCGAACCGCTGAACTTGTCTTCAAAGTTTCCTGATTTGGAACCAGAAGGCGTTGATATTCTTTCGAAGTTGCTTTGTCTGGATCCAAAAAAAAGAATTTCAGCTGAAGCAGCTCTTGACCACGCATTCTTCAATAATGATTTGTGTAAAACACTGATGAGCAAGAGAAAACGGATCCAAGACGTTGCTGAACCTAGAGGTACGAAGAAAATCGAACTTGGGGACAAGAGAAAACCGATCCGAGACGTTGCTGGACCTAGTGGTACAAAGAAAATCGAACTTGGGTACTCCACAGATTAA 1338 0.4215 MVLRRQNEGRINEGMNQREAVTSIRFCREMLFYKLPTITFKNRIRSLHSFPSSALYSLLTDLFSVLILTKMSGILEQTNVFKSLFVGCLECRVWYRRWRSSKADLNLDQFNIRVIEPVGFGPFRKVYRCHDVNSNRVVAVKEVYAGDGSETEMINERIEFLKDQPHNNVVRLLYTLKRGCYLYLVFEYITPNLYYFINLSEDLRYPKQRNYMLYQMLAAVAHYHSNGILLRDLKPQNLLMDFRDGFLKLCDFGLYSSFGDPEPCDIPVSLYTAPEVLLDNNEHSRPSDLWAVGCIFGEIVIKKPLFHIGKSNQDQLRGIFGLLGTPTEESWPGISDLCPTLAFYPKFEPLNLSSKFPDLEPEGVDILSKLLCLDPKKRISAEAALDHAFFNNDLCKTLMSKRKRIQDVAEPRGTKKIELGDKRKPIRDVAGPSGTKKIELGYSTD 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1373g0001 445 SMART serkin_6 112 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1373g0001 445 ProSiteProfiles Protein kinase domain profile. 112 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1373g0001 445 Gene3D Transferase(Phosphotransferase) domain 1 201 418 - -
Prci1373g0001 445 MobiDBLite consensus disorder prediction 416 445 - -
Prci1373g0001 445 MobiDBLite consensus disorder prediction 416 430 - -
Prci1373g0001 445 Gene3D Phosphorylase Kinase; domain 1 106 191 - -
Prci1373g0001 445 FunFam Mitogen-activated protein kinase 192 398 - -
Prci1373g0001 445 SUPERFAMILY Protein kinase-like (PK-like) 114 393 IPR011009 -
Prci1373g0001 445 PANTHER CELL DIVISION PROTEIN KINASE 114 391 - -
Prci1373g0001 445 Pfam Protein kinase domain 114 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1373g0001 107 392 Core Cell Cycle Gene Families AT3G48750 40.878 3.87e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Prci1373g0001 Pkinase 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1373g0001 K02206 - mof:131143523 237.269