Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci136g0008 ATGATGTGCAAAATGAAGGTCAAACATCTGGAGCAGCAACTGACACCGGAGCAGAGTCAAAGCCCCAGGGCTTCTTCAATTGCAGATTGTGACATGGTCTTTGATACTGAGAATGAGCGCGCAAGCCCAAATATTGGTCCTGTTGACCAAACTCATATGGGAAATAATGATGATTGTCTGAATTCAAGCATTTCTTGTGATAACAATTTTCAGATTGATGCTGCAAATGGAAATCTGTCTCAGGAATTCAACATTTCTTCTGTTGATGTGTCAAGTAACAGTAATGTCATAACAGCTGAGGAGGAGCTGTGCATGATACCAAAAATTGGCATGGAGTTTGATTCAGAAGACCATGCTTACAAGTATTATAGCAGGTATGCTGTTTTGAAAGGTTTCAGCATAAGAAAAGATTTTGTCAACAAAAGTAGGGTGAATGGTGCGGTGGTATCTAGAAGATACACTTGCTATAGACAGGGTTATGGGCCTAATAAACATAGTGCCAATGTAAGGAAATCCCATCTGGAAACAAGGACTGGATGCCTGGCGCATATGACTATTGCTCGTCAGCCTAATGGCAAGTTTCATGTCACTCATTTTGAAGCAGGGCACAATCATGAGTTTGCAACACCCTGTACGGCTTATATGTTACCATCACAGAGAAGATTGAGTTTTGCTCAAGCAGTTGAATCTAACTTGTCTAATAATTCTGTGTTGGATGGGGTACCAAAACTTGGAATGGGATTTGACTCAGAAGATCATGCATATGACTTTTATAATACATATGCTGGACGTGTAGGTTTCAGTGTTCGGAAAGATTATGTAAATAGAAGTAAAATTGATGGTGCTGTCGCATCTAGGAGGTTCACATGCTTTCGGGAAGGTTTTCGGCAGAAAGACAAACGTGATATGACTGTGAAGAGGCCTCGAAAAGAGACTAGAATTGGATGTTTAGCACAACTGGTCATTTCTCGTCAGCCTGATGGTAGATATTGTGTAACTCATTTTGAAGAAAAGCATAATCATGAGCTTGTTGCTGCTTGTAGAGTTCACATGTTACGATCACAGAAGAGAATAGCCACAAATCAAGCCATTGAGAGCAACATGCTAGATGGTTCCAAGGTGCATCCTAAGTCTGGACCAAATTGCAAGGCTATTAAAGGTTTAGATGATACGGGTTGTGACCCCATAGAATATGGAAATAAATTGCCTTTCAAGCACACAAGAGAAATGAAAGAGGGAGAAATTGAAAAGCTAAAGCATCACTTTCGAAGCAAGCGATCCAAAAATCCTTCCTTCTTTTATGCCTTCCAACGTGATTCTAGTGATCAAATAACTAATATGTTTTGGGCAGACACAAAGATGGTAGGAGACTACTGTGATTTTGGTGATGTTGTTTGCTTTGATTGTAGTTACAGATTTTGTAGAGACTCCCGCCCATTTGCTCCATTTCTTGGTGTCAATAATCACAAGCAAATGGTTATCTTTGGGGCTGCACTTCTATATGATGAAACAGTTGAATCTTTCAAGTGGCTATTTCAAGTTTTCTTGGAGGCAATGTCCAGGAGACAGCCAAAGACAATTCTTATAGATCAAGATGAAATAATAGCTGAAGCAGTCTCTTCTGTCTTGCTTGAAACCAACTGCCAAATCTGTGCTTGGCATGTGTACCAAAATACACTAAATCAACTCAGTCACCTGTCTGTGGGATCTAATTCTTTTGTTAATGACTTGAGAAGCTGTTTTTTTGATCACGAGGAGGAGGAAGGCTTGGTTAATGCATGGAATGATTTCCTGAACAGGTATAATCTTTGGAAAAATGAATGGTTGTGTCGAATATATGAAAGCAGAGACAATTGGGCCCCAGCATATGGAAGGCAAAATTTCTGTGCTGACATAACAAGTCTGCTGTGGAAAGAAAATCTTATTGGTAGCTTGAAGAAGCACCTAACGAATGATACAGATGTGATCTCATTTCTCAAGCATCTTGGGAAGGTGGTGACTGATTGGCACTATAAGGAATTAGAAGCCAATTATGATATGAGCCTGCGTATGCCAGCACTGATGGGAGATGTGATTCTTTTGAAGCATGCAAGAGATCCATACACACCAAAGATATTTGAATTATTTCAGAAAGAATATGAAACTTGTTTAAATCTAGTGATAAAGCATTGCAGTGAGAGTGGATCATTGTACAAGTATAAAGTTAGCTTATATGAACACGTACGAGAGTATACAGTTACCTTTAATTCATCTAACGAGACTGTCAGTTGCAGCTGTATGAAATTTGAGTCCATGGGAGTCTTATGCAGCCATGCATTGAAAGTCCTTGATTACAGGAATATAAGGATACTTCCATCATTGTACATCTTAAAGAGATGGACAAAAGACGCGAGTTTTTTGAGGCAAACTTGA 2412 0.3947 MMCKMKVKHLEQQLTPEQSQSPRASSIADCDMVFDTENERASPNIGPVDQTHMGNNDDCLNSSISCDNNFQIDAANGNLSQEFNISSVDVSSNSNVITAEEELCMIPKIGMEFDSEDHAYKYYSRYAVLKGFSIRKDFVNKSRVNGAVVSRRYTCYRQGYGPNKHSANVRKSHLETRTGCLAHMTIARQPNGKFHVTHFEAGHNHEFATPCTAYMLPSQRRLSFAQAVESNLSNNSVLDGVPKLGMGFDSEDHAYDFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRDMTVKRPRKETRIGCLAQLVISRQPDGRYCVTHFEEKHNHELVAACRVHMLRSQKRIATNQAIESNMLDGSKVHPKSGPNCKAIKGLDDTGCDPIEYGNKLPFKHTREMKEGEIEKLKHHFRSKRSKNPSFFYAFQRDSSDQITNMFWADTKMVGDYCDFGDVVCFDCSYRFCRDSRPFAPFLGVNNHKQMVIFGAALLYDETVESFKWLFQVFLEAMSRRQPKTILIDQDEIIAEAVSSVLLETNCQICAWHVYQNTLNQLSHLSVGSNSFVNDLRSCFFDHEEEEGLVNAWNDFLNRYNLWKNEWLCRIYESRDNWAPAYGRQNFCADITSLLWKENLIGSLKKHLTNDTDVISFLKHLGKVVTDWHYKELEANYDMSLRMPALMGDVILLKHARDPYTPKIFELFQKEYETCLNLVIKHCSESGSLYKYKVSLYEHVREYTVTFNSSNETVSCSCMKFESMGVLCSHALKVLDYRNIRILPSLYILKRWTKDASFLRQT 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci136g0008 803 MobiDBLite consensus disorder prediction 1 26 - -
Prci136g0008 803 Pfam MULE transposase domain 464 558 IPR018289 -
Prci136g0008 803 Pfam SWIM zinc finger 744 779 IPR007527 GO:0008270
Prci136g0008 803 Pfam FAR1 DNA-binding domain 121 208 IPR004330 -
Prci136g0008 803 Pfam FAR1 DNA-binding domain 256 344 IPR004330 -
Prci136g0008 803 MobiDBLite consensus disorder prediction 12 26 - -
Prci136g0008 803 ProSiteProfiles Zinc finger SWIM-type profile. 744 780 IPR007527 GO:0008270
Prci136g0008 803 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 91 226 IPR031052 GO:0006355
Prci136g0008 803 SMART 26again6 755 782 IPR006564 GO:0008270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci136g0008 MULE 1.3e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci136g0008 K17604 - gmx:102659753 1130.55