Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1349g0001 ATGGAGTCATGGAAGTTGGAAGAAGGAGTGACGACCTCCAATGGCGGCAGCAACAGCAGTGGAGGTTGGTCACCAGCCGTAAAAAGCTTATTACAAAAAGTGATTGCAGAACTGATGGGGACGTACTTCCTAATATTCGCTGGATGTGGGGTGTTGACAGTAGAGAAAATATACGGATCAGTGACATTCCCAGGGATTGCAGTGACATGGGGATTGACAGTGTCAGCTTTGATTTATGCTCTTTCTCATGTCTCTGGTGCTCATTTCAATCCTGCTGTTACCATTGCCCTCACCCTCTTCCGCCTCTTCCCCTGTTGGAAGCAGGCTACATTATATGTCGTGGCTCAGTTTGTGGGGGCTCTTCTTGCTAGCCTCACCTTGGTGGCACTCTTTGATGTTACGCCACAAGCTTATTTTGGAACCCTGCCCATTGGGTCTCACCTGCAGTCATTTGGTGTTGAAATCATCATCACCTCTCTCCTCGTGTTTGTCATCTGTGGGGTTAATACTGATCCCAGAGCGAAAGGTGGGTTCGAAGGAGTTGCTGTTGGAATGACAATCATGTTGAATGTTTTTATTGCCGGGCCAGTATCGGGAGCATCGATGAACCCAGCAAGGAGTGTAGCGCCGGCAATAGTGAAGAGCGTTTACAAGGGAATTTGGGTTTACATTGCGGGTCCAATAGTTGGAGCCATGGTTGGAGCATTCATTTATCACCTCCTCAGATCCAATCCTGATCCAACCCCACTCCCTCAAAACTAA 762 0.4816 MESWKLEEGVTTSNGGSNSSGGWSPAVKSLLQKVIAELMGTYFLIFAGCGVLTVEKIYGSVTFPGIAVTWGLTVSALIYALSHVSGAHFNPAVTIALTLFRLFPCWKQATLYVVAQFVGALLASLTLVALFDVTPQAYFGTLPIGSHLQSFGVEIIITSLLVFVICGVNTDPRAKGGFEGVAVGMTIMLNVFIAGPVSGASMNPARSVAPAIVKSVYKGIWVYIAGPIVGAMVGAFIYHLLRSNPDPTPLPQN 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1349g0001 253 NCBIfam MIP family channel protein 36 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 ProSitePatterns MIP family signature. 88 96 IPR022357 -
Prci1349g0001 253 Gene3D Glycerol uptake facilitator protein. 8 247 IPR023271 -
Prci1349g0001 253 MobiDBLite consensus disorder prediction 1 23 - -
Prci1349g0001 253 SUPERFAMILY Aquaporin-like 27 250 IPR023271 -
Prci1349g0001 253 CDD MIP 32 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 PANTHER AQUAPORIN NIP2-1 20 244 IPR034294 -
Prci1349g0001 253 Pfam Major intrinsic protein 29 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 PRINTS Major intrinsic protein family signature 32 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 PRINTS Major intrinsic protein family signature 108 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 PRINTS Major intrinsic protein family signature 153 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 PRINTS Major intrinsic protein family signature 70 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci1349g0001 253 PRINTS Major intrinsic protein family signature 184 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1349g0001 5 247 Major Intrinsic Protein MIP AT5G37820 57.143 1.11e-93 276