Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1348g0002 ATGATGGATTTGGCGGCGCAGAAGAAAGAACTTGATCCCAACAATGCTACCAATGACACCAATAACAATACTAACACTGTTAATCCTCAAGAAAACCCAGATTCGTCGCCTTCATTCGCGTCTGATAGTAACAATAACCCTGATAAAGGAGCTGAAGAACGCCAAGCTCGTGACCTTAAAGCCGGCCTTCATCCACTTAAGCACAAATTTGTATTTTGGTACACTCGCCGGACACCTGGAGTTCGAAATCAGACATCGTATGAGGACAACATAAAGAAAATTGCTGATTTCAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTTCTCGCCCTTCTTCTTTGCCAATTCCAACGGATCTGCACCTCTTTAAGGAAGGAATTCGCCCTTTGTGGGAGGATTCTGCTAACTGCAATGGTGGAAAGTGGATTATACGATTCAAAAAGGTTGTGTCAGGTCGTTTTTGGGAGGACTTGGTTCTTGCTTTGGTGGGTGACCAACTGGATTATGGAGACAACATATGTGGTGCAGTTCTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCATCTGATCATCAGGCTGTAATGGCTCTGAGGGATTCAATTAAACGTCACTTAAAACTTCCTCATAGCTATGTCATGGAATACAAGCCTCATGATGCCTCCTTGCGAGACAATTCATCTTACAGAAACACTTGGTTGAGAGGATAG 732 0.4331 MMDLAAQKKELDPNNATNDTNNNTNTVNPQENPDSSPSFASDSNNNPDKGAEERQARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKKIADFSTVEGFWVCYCHLSRPSSLPIPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1348g0002 243 ProSitePatterns Eukaryotic initiation factor 4E signature. 121 144 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Prci1348g0002 243 MobiDBLite consensus disorder prediction 11 46 - -
Prci1348g0002 243 FunFam Eukaryotic translation initiation factor NCBP 36 236 - -
Prci1348g0002 243 Pfam Eukaryotic initiation factor 4E 65 223 IPR001040 GO:0003723|GO:0003743|GO:0006413
Prci1348g0002 243 MobiDBLite consensus disorder prediction 1 55 - -
Prci1348g0002 243 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 36 232 IPR001040 GO:0003723|GO:0003743|GO:0006413
Prci1348g0002 243 SUPERFAMILY eIF4e-like 38 239 IPR023398 -
Prci1348g0002 243 Gene3D RNA Cap, Translation Initiation Factor Eif4e 36 236 IPR023398 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1348g0002 48 243 Eukaryotic Initiation Factors Gene Family AT5G18110 83.163 1.73e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1348g0002 K03259 - qsa:O6P43_009857 412.535