Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1340g0001 ATGGAAGTCAATACCATTTTTGCTGTTGCTGCAGAATCACCCAGTGTTGCTCTCGACGAGCATGACCACCACCACCACTACCACCATCCACATGTCCCCTCTAAAACCATTCTTATACTCATCATAACCCTCACCTCCTTCATGCTGCTCCTCGCCATTTCACTCATCATCTTCCTCCTCCGACGCCTTAAATCCTTCCCCAGGAATAATCCAACCACTAAACTCGCCGCCGGCGAAGAAGAGCTTAACGATACCAGCAGCAGATTCATGGCCTCAACAGCTTCCAACTTCACGTCTAGCCCAGACGTGAAAGGAGGTTGTATTTATGGAGGAAACATGAACATGAGCAGGCCAGCACTAGCAGCACCTAAATTCAGAGGGGTTCAAGTGTTCACATACAAAGAGCTAGAACTGGCGACGGAGGGATTCAGTGAAGCAAATGTGATTGGCAATGGAGGATCTGGTTTGGTGTATAAGGGAATCCTCAGTGATGGCACTCTAGCCGCCGTTAAGTTGCTGCGCAGGGAAGGCAAGCAAGGAGAACGTGCCTTCAGAATAGAGGTGGATCTTCTTAGCCGATTACACTCTCCTTATTTGGTGGAGCTAATTGGGTATTGTGCGGACCAGCGCCACAGGCTGCTCGTATTTGAACACGTGGCCAATGGGACCCTCCAACACCATCTTCATTCCGCTCAGGATCATCTTCAGCCGTTGGATTGGTGGACCCGGATGAGGGTGGCCCTTGACTGTGCCAGGGCCTTGGAGTTCCTGCACGAGCACGCGGGCCCCACGCCTGTGATCCACCGCGACTTCAACTCCAACAATGTCATACTGGATCATAACTTCCGCGCCAAGGTTTGTGACTTTGGATTGGCCAAGATGGGCTCCGACAAGATCAATGGTCAAGTTTCCACCAGGGTTTTAGGGACCACCGGATACCTAGCTCCAGAGTATGCGTCCACAGGGAAGCTCACGACAAAGTCAGACGTATACAGCTACGGCGTCGTTTTACTGGAGTTGCTCACTGGGCGAGTGCCCGTTGATATTAATCGCCCTCCCGGTGAACATGTCCTTGTCTCTTGGGCTCTTCCGAGGCTAACTAACAGAGACAAGGTGGCGGAGATGGTTGATCCAGCTCTGCGAGGACAGTACTCTAAGAAGGATCTAGTTCAGGTAGCAGCCATAGCAGCGATGTGCATACAGCCAGAAGCAGATTATAGGCCGTTGATGACAGATGTAGTGCAATCTCTAGTACCACTTGTTAGGAACACATCTTCTGTTAGTTCATCAAGCTCAAGTTCATTAAGATTTCAAAAACATGCATCAAGTCCGAACCATTCGCTGCTGCACAACAGATAG 1359 0.5048 MEVNTIFAVAAESPSVALDEHDHHHHYHHPHVPSKTILILIITLTSFMLLLAISLIIFLLRRLKSFPRNNPTTKLAAGEEELNDTSSRFMASTASNFTSSPDVKGGCIYGGNMNMSRPALAAPKFRGVQVFTYKELELATEGFSEANVIGNGGSGLVYKGILSDGTLAAVKLLRREGKQGERAFRIEVDLLSRLHSPYLVELIGYCADQRHRLLVFEHVANGTLQHHLHSAQDHLQPLDWWTRMRVALDCARALEFLHEHAGPTPVIHRDFNSNNVILDHNFRAKVCDFGLAKMGSDKINGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDINRPPGEHVLVSWALPRLTNRDKVAEMVDPALRGQYSKKDLVQVAAIAAMCIQPEADYRPLMTDVVQSLVPLVRNTSSVSSSSSSSLRFQKHASSPNHSLLHNR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1340g0001 452 CDD STKc_IRAK 149 420 - -
Prci1340g0001 452 Gene3D Transferase(Phosphotransferase) domain 1 219 442 - -
Prci1340g0001 452 SUPERFAMILY Protein kinase-like (PK-like) 123 417 IPR011009 -
Prci1340g0001 452 ProSitePatterns Protein kinases ATP-binding region signature. 149 171 IPR017441 GO:0005524
Prci1340g0001 452 MobiDBLite consensus disorder prediction 428 452 - -
Prci1340g0001 452 ProSiteProfiles Protein kinase domain profile. 143 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1340g0001 452 FunFam Receptor-like serine/threonine-protein kinase ALE2 219 434 - -
Prci1340g0001 452 Pfam Protein tyrosine and serine/threonine kinase 147 417 IPR001245 GO:0004672|GO:0006468
Prci1340g0001 452 PANTHER OS01G0750732 PROTEIN 34 432 - -
Prci1340g0001 452 FunFam Serine/threonine-protein kinase PBS1 112 218 - -
Prci1340g0001 452 Gene3D Phosphorylase Kinase; domain 1 116 218 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1340g0001 127 447 Receptor kinase-like Gene Family AT3G58690 64.417 8.71e-150 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Prci1340g0001 PK_Tyr_Ser-Thr 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1340g0001 - - pcin:129299908 860.136