Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1306g0002 ATGGCAGAGCTAGTTGGTGGAGCATTTCTCTCTGCAACCCTTCAGGTGGCTTTTGATAGATTGGCTTCTCGCGATATACTTGACTACTTCCGTGGCAGAAAACTCAATGAGGGCTTGCTCAAAAGGCTTCACATCATCCTTATATCTATTAACCAAGTTCTTGAAGATGCGGAGGAAAGTCAGTACAGAAACCCCAATGTGAAGCAGTGGCTTGATGAGCTTAAAGATGCTGTCTTTATTGCTGAGGACCTCCTGGATGAGATTGCAACTGAGGCATCGCGACAAAAGCTGGAATCTGAATATCGAGCCACCACGAGTAAGATTCTCTTGTCAAACAAAATGAGTAGCAGCGAGCCGCCCATGCAAGTAATTACTATCGTGGGTATGGGTGGTGTGGGTAAGACCACTCTTGCGCAGCTTGTGTACAATGACAAAAGGATGGAGGATCTGTTTCAACTTAAAGCTTGGGTGTGTGTTTCAGAAGAATTCAATGTTGTTCAAGTCACAAAAGCAATTCTTGAAGCAGTTGCTTGTTCCACTAAAGAGTTCAATGACTTGAATTTGCTTCAACTTCAGTTAAGGGAAAGATTGATGGGGAAGAAATTTTTCCTTGTGCTCGATGATGTTTGGAATGAGAATCGTACAACTTGGGAGATCTTGCAAGCTCCCTTCAACTATGGAGCTCGAGGAAGTAAAATTTTTGTAACAACTCGCAATAAAAAGGTAGCATCAGTTATGCACTCTGCACATATACATCATTTAAAACCTTTAGCAGAAGAAGATTCTTGGAAATTATTTGCAAAGCATGCATTTAATGACCAACTTAGTGGTATGGATTCAAATCTTGTATCAATTGGTAGAAAAATTGTCAAGAAATGCGGAGGATTGCCTTTAGCAATAAAAACTTTAGGTAGCATGTTGCACAGAGAACAATCTTGTCAGGAATGGGCTAATATATTAGAGAGTGATATATGGCATTTATCAGAGGATGACAGCAACATAATTCCAGCTTTAAGATTGAGTTACCATTACCTACCTTCAAATCTGAAATGTTGTTTTTCTTTTTGCTCTGTCTTTCCAAAAGATTATGAGATAGACAAGGATCTCTTAATCCAGTTGTGGATGGCAGAAGGTTTAGTGCATTCTTGGCGAAAAGACCGAAGCATTGAGGAAGTGGGCAATGAATTCTTCAATGATCTGGAGTCAAGATCATTTTTTGAGCCATCAAGGAGAAGAAATGGTCGATACTTCATTATGCATGACCTTTTGAATGATTTAGCAAAATCAGTGATGGGAGAATTTTGTTTTCTGCTGGACAGCAACTCTTCACAAAATATTCATGTGAAGACTCGCTACTTTTCATACTTGAGCACAAATGATCTCAAATACGTTGACAGTACCATTTTCAATTGTAACCATTTACGCAGCTTCCTGCCACTTAAGCTCAATAACCCTATCAGTTGTAATGTGATGGGTAATCTCTTTTCTAGACTTGATTGTCTCAAGTATTTGCGAATGTTATCTTTGTCTGGGTACAAGAATGTCAAAGAGCTTGTGGATGATTTGAGTAATTTAAAACATCTACGTTATCTTGATATTTCTTTCACTTCAATTAAAGAGTTGCCTAATTCAATCTGTTTGCTGATTAATTTGCAAACGTTGAAATTAGTCAACTGTTGTCACTTGACTGAATTGCCTTCAGATTTGCACAAGCTCATCAATTTGCGTCATCTTGATTTGCGTGGGACCAGCATACAAAAGATGCCTGAGCATATGGGAAAGCTAGAACATCTTCGAACATTAACTCGTTTTGTCGTGGGAAAAAATAGAGGATCTGATATGAAGGAGTTGGGGAAGTTAAGCTATCTAAGAGGTACAATATCTATTCTAATCCTAGACAGTGTCATTGATCCTATAGATGCCAAGGAGGCCAATATGAAAGAGAAGAAATATTTGGAAGAATTAGTGTTGGAATGGTGTAAAAGCAATGAAGATTCACAGCACGAAAGGTGCATCTTGGAGTCTTTCCAACCTAACAAGAATCTGAAAAAGCTCACTATTAATTTCTATAATGGAACTAGATTTCCGAATTGGTTCGAGGCTCCTTATTTACCTAATTTAGTGTCTCTTCAGCTGAGTGGAAGTAACTATTGTTTTTGTTTGCCACCCCTCGGACAGCTACCCTGTCTCAAGCAGCTCCAAATCTACAAGTTTGTTGAAATAGAACTGATTGGACCTGAATTTTATGGGGATAGTTCATCAGGTGCTCCATTTAGATGCCTGGAATGTTTAACATTTTCACACATGAAACAATGGGAAGAATGGAATACATGTTATGAAGGTGAAAGTTTCCCGTGTCTTCAAGAGCTTCAAATATGGAATTGTCGCAAGTTGAGAAAGTCCTTGCCTCAATTTCTTCCTTCTCTGAAAATTCTAAATATTAGCAACTGTGAAAATCTTGAGGCTCCACTTCCCAATGCCTTTCCCTTGGACCAGCTTATGTTAAGCAATTGTAAGATTTCACTGCACGATGTGCCAAACAGCTTGACAAGCATGTCCATGTCTGGAATTAGAATTAATGAGTCCTGCCTGAACCATATTCTGCTCAGTAACCCGTCTCTTGGACAACTGTACCTGAGTAGTTGTGATGAACTTGTGTCACCCTCTATAAGTGGGATTGGATTTTCAACTTCCAAGCTTACTTCCATGTTCTTTGATAAGTTGAGTAATCTAAAGTCACTTCCTGATGACATGCATATCATTTTTCCATATCTTCATTCTTTGACATTGTGGGACTGTCCAGAGCTAGAATCACTTCCCCTAGAAGGTTTGCCTCCAAGCCTTGTTGAACTTACAATCATCCGTTGCCCCAAACTCTTTGCTTCCCGCATGAGCTGGGGCTTGCACAAGCTTTTTTCTCTACGACACATCACTTTTAGTGTTGAGTTAGAGAGTGAGGAGTCATTCCCAGAGGAAGCATTGCTCCCACCTAATGTCACATCTCTCACCATGAAAAATTGCTCAAATCTAAAATCAATAAATTACAAGGGTCTTCTCCACCTCAAGTTTCTTGAATCCTTGTGTGTTTGGGATTGCCCCTTATTGTGTCCCCAAGGCTTGCTAGAGAAGGGTCTACCCAAGTCGCTTTTGCGGTTAGAAATTTGGGGCAATTGTCCATTGCTTAAGGAGCAGTTCCAAGAGGAGAAAGGACAAGGGTGGCCTGAACTTTCTCACATCCCTCATGTGTGCACTCATTAG 3258 0.3987 MAELVGGAFLSATLQVAFDRLASRDILDYFRGRKLNEGLLKRLHIILISINQVLEDAEESQYRNPNVKQWLDELKDAVFIAEDLLDEIATEASRQKLESEYRATTSKILLSNKMSSSEPPMQVITIVGMGGVGKTTLAQLVYNDKRMEDLFQLKAWVCVSEEFNVVQVTKAILEAVACSTKEFNDLNLLQLQLRERLMGKKFFLVLDDVWNENRTTWEILQAPFNYGARGSKIFVTTRNKKVASVMHSAHIHHLKPLAEEDSWKLFAKHAFNDQLSGMDSNLVSIGRKIVKKCGGLPLAIKTLGSMLHREQSCQEWANILESDIWHLSEDDSNIIPALRLSYHYLPSNLKCCFSFCSVFPKDYEIDKDLLIQLWMAEGLVHSWRKDRSIEEVGNEFFNDLESRSFFEPSRRRNGRYFIMHDLLNDLAKSVMGEFCFLLDSNSSQNIHVKTRYFSYLSTNDLKYVDSTIFNCNHLRSFLPLKLNNPISCNVMGNLFSRLDCLKYLRMLSLSGYKNVKELVDDLSNLKHLRYLDISFTSIKELPNSICLLINLQTLKLVNCCHLTELPSDLHKLINLRHLDLRGTSIQKMPEHMGKLEHLRTLTRFVVGKNRGSDMKELGKLSYLRGTISILILDSVIDPIDAKEANMKEKKYLEELVLEWCKSNEDSQHERCILESFQPNKNLKKLTINFYNGTRFPNWFEAPYLPNLVSLQLSGSNYCFCLPPLGQLPCLKQLQIYKFVEIELIGPEFYGDSSSGAPFRCLECLTFSHMKQWEEWNTCYEGESFPCLQELQIWNCRKLRKSLPQFLPSLKILNISNCENLEAPLPNAFPLDQLMLSNCKISLHDVPNSLTSMSMSGIRINESCLNHILLSNPSLGQLYLSSCDELVSPSISGIGFSTSKLTSMFFDKLSNLKSLPDDMHIIFPYLHSLTLWDCPELESLPLEGLPPSLVELTIIRCPKLFASRMSWGLHKLFSLRHITFSVELESEESFPEEALLPPNVTSLTMKNCSNLKSINYKGLLHLKFLESLCVWDCPLLCPQGLLEKGLPKSLLRLEIWGNCPLLKEQFQEEKGQGWPELSHIPHVCTH 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1306g0002 1085 SUPERFAMILY L domain-like 419 825 - -
Prci1306g0002 1085 FunFam Probable disease resistance protein At1g63360 342 429 - -
Prci1306g0002 1085 FunFam Probable disease resistance protein At1g61300 87 250 - -
Prci1306g0002 1085 Gene3D Ribonuclease Inhibitor 620 804 IPR032675 -
Prci1306g0002 1085 Gene3D Ribonuclease Inhibitor 805 960 IPR032675 -
Prci1306g0002 1085 ProSiteProfiles Leucine-rich repeat profile. 527 548 IPR001611 GO:0005515
Prci1306g0002 1085 Gene3D Ribonuclease Inhibitor 498 619 IPR032675 -
Prci1306g0002 1085 Pfam Rx N-terminal domain 9 100 IPR041118 -
Prci1306g0002 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 356 IPR027417 -
Prci1306g0002 1085 Gene3D - 256 340 IPR042197 -
Prci1306g0002 1085 Gene3D - 51 252 IPR027417 -
Prci1306g0002 1085 Pfam NB-ARC domain 111 321 IPR002182 GO:0043531
Prci1306g0002 1085 PANTHER DISEASE RESISTANCE PROTEIN RP 51 800 IPR044974 GO:0006952
Prci1306g0002 1085 SUPERFAMILY RNI-like 760 1041 - -
Prci1306g0002 1085 Gene3D - 341 430 IPR036388 -
Prci1306g0002 1085 SMART LRR_typ_2 525 548 IPR003591 -
Prci1306g0002 1085 SMART LRR_typ_2 572 595 IPR003591 -
Prci1306g0002 1085 PRINTS Disease resistance protein signature 196 210 - -
Prci1306g0002 1085 PRINTS Disease resistance protein signature 123 138 - -
Prci1306g0002 1085 PRINTS Disease resistance protein signature 804 820 - -
Prci1306g0002 1085 PRINTS Disease resistance protein signature 293 307 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1306g0002 106 601 WRKY Transcription Factor Family AT5G45050 25.621 8.78e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1306g0002 - - pcin:129299815 2152.87