Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1303g0008 ATGGGGTACTTAAGCACATTGGACAGCAAATCACTGGTTGGAGCCAACAAGAAAGCAGTAGAGATGCGAGCTGCGAGGAGGATGGAAGAATACCAAAATAATGAGGAGCTTCTTGAGATTTCTAAACTGTATGAATCACAGAAGGTTGAATTCAGGATAGAGTTGGTCACGGCAACTTCAGCTAAGGAGGTTGCTTTAGACAAAGCGAAAGAACTAAATGCAACTTGGGTGATATTGGACAGGCAGATGAAGAAAGATGAGAAGTTTTTCCTGCAGGAGCTTTCTTGTGGTATATCAAGATTGAAGCGTAACAATAGGATTGAACATTTGAGAGGCCCCCCAGTTCTCCCCACAGAGATATTTATCAGTCCTGTACCAGGATGTCATGACGATGAGGATAACAGTGTGGAAGACCCCAAGATTGGTCAAATAAAAGAGGATCTTCCCAGCATGGAAGAAGAGATGCAAAGAAACTCAGATAAGGGGGATGACTTTACATTTACTGACAGTAATCAAACAAGTCAGACAAAACCTGATGAACCCAGAACAGTTGTAGAAGAGACATGGAAGAGCATCCATGATGAAGGGCAGCACTTCAGGCAGGCAACAGGAGGTGATCTACACATAGATGGAACAAAAGCTGAGCTGCTGAGCCATGATCAAGAAGATAAAACAGATGGAAAGCAAGAGAAGAGCATTTTTGGGAATACAGAATGCTCTATCTGCTCAGTCTGCAAAAGTAGACGGCCAGATAGTGGATGGAAAAAGGACTTCTCATATATCGAACTTCAAGTTGCTACAGATGAATTTTCAATTACCAACTCACTTTCTGAAGGAGAATGTGGATCTACTTTCAAAGGTCAGCTTGATTGTCAGCTGAAAATAGTGGTGAAGCAGCATCGACTCACAGATGCCCAAGTAGAGAAACAAATGATGTCTCAAGTGCAATTGATCCTCAAGGCTAGACATAAGAATGTGGCCATGCTGTTGGGTTCCTCCATAGAAGAAAGTCAGCTACTAGCTGTATATGAGTATGCATGCAATGGTTCACTTGACAAGCATCTATCTAAGAATAGTTGCAGGCCATTAAGCTGGGGAAAAAGGGTGAAAATAGCTGTAGGTGTCTCCATGGGTCTAAAGTACTTACATGATAATAACATAATTCATGGACGTATAAAGCCAAGCAACATTCTTCTAAACCATGAGTTCGAACCAATGCTTGGGAGAGCAAAATGTGAAGCAAAAAAGTCCCACAAGGATAAAAGTTTGGTATACGCAGCACCAGAGTGTTTGGAGAATTGGAAACTAACAGCCAAGACGGATGTATACTCCTTTGGAATGGTTCTTTTAGAGCTTATCACTGGTCAGAGGGCTACAGACAAAATATCAGGAGAGAAAAACCTTGTTGAATGGGCAAAGCCTCTTCTTGGAACAAAGAAGTATCCGCAATTGGTGGATCCTGCAATTGGAACCTCCTACGAAGAAGAACAACTTCACTGGTTGGCCCAAGTGGTCTCTGAATTACGAGGCATAATAGAGAGTGAAGAGGGCTGTGTTACTGTAGACTTTTCTCCAGAAATTTCAAGATCAACATGTGGCATATCAGACATTACTTCTACTCAAG 1624 0.4206 MGYLSTLDSKSLVGANKKAVEMRAARRMEEYQNNEELLEISKLYESQKVEFRIELVTATSAKEVALDKAKELNATWVILDRQMKKDEKFFLQELSCGISRLKRNNRIEHLRGPPVLPTEIFISPVPGCHDDEDNSVEDPKIGQIKEDLPSMEEEMQRNSDKGDDFTFTDSNQTSQTKPDEPRTVVEETWKSIHDEGQHFRQATGGDLHIDGTKAELLSHDQEDKTDGKQEKSIFGNTECSICSVCKSRRPDSGWKKDFSYIELQVATDEFSITNSLSEGECGSTFKGQLDCQLKIVVKQHRLTDAQVEKQMMSQVQLILKARHKNVAMLLGSSIEESQLLAVYEYACNGSLDKHLSKNSCRPLSWGKRVKIAVGVSMGLKYLHDNNIIHGRIKPSNILLNHEFEPMLGRAKCEAKKSHKDKSLVYAAPECLENWKLTAKTDVYSFGMVLLELITGQRATDKISGEKNLVEWAKPLLGTKKYPQLVDPAIGTSYEEEQLHWLAQVVSELRGIIESEEGCVTVDFSPEISRSTCGISDITSTQ 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1303g0008 541 ProSiteProfiles Protein kinase domain profile. 270 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1303g0008 541 SUPERFAMILY Protein kinase-like (PK-like) 254 468 IPR011009 -
Prci1303g0008 541 Pfam Protein tyrosine and serine/threonine kinase 272 465 IPR001245 GO:0004672|GO:0006468
Prci1303g0008 541 PANTHER OS01G0253100 PROTEIN 172 506 - -
Prci1303g0008 541 Gene3D Transferase(Phosphotransferase) domain 1 347 516 - -
Prci1303g0008 541 MobiDBLite consensus disorder prediction 165 179 - -
Prci1303g0008 541 FunFam Proline-rich receptor-like protein kinase PERK8 232 345 - -
Prci1303g0008 541 Gene3D Phosphorylase Kinase; domain 1 243 345 - -
Prci1303g0008 541 MobiDBLite consensus disorder prediction 146 184 - -
Prci1303g0008 541 MobiDBLite consensus disorder prediction 146 164 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1303g0008 234 519 Trihelix Transcription Factor Family AT1G70460 35.179 1.95e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci1303g0008 PK_Tyr_Ser-Thr 1.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1303g0008 - - pcin:129299809 1087.02