Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1303g0007 ATGGCCGTCACCTTATCAGGTCTCCATACAGAATCAGGACTCAAGTCCCTTAATGAATTCCTCTTTGGCAAGACCTACATTTCTGGCGATCAGTTGACCAAGGATGACATTAAGGTCTACGCCTTTGTTTCGAAGAACCCAAGCGATGCTTTTCCCAATGCCAGCAAGTGGTACGATGCCGTCTCTTCACGTCTTGCTGAAAGCTTCCCTGGAAAAGCTCAAGGGGTGAAATTCAGCGGCCAAGCTGCTCCAGCTGAAGCTAGTCCTGCCAAGGCGGCTGCTCCTGCTGATGATGACGATGACCTTGATCTGTTTGGTGACGAGACAGAGGAGGAAAAGGCAGCAGCAGAGGCAAGAGAGGCTACTAAAAAGGAATCCTCCAAGAAGAAAGAGAGCGGGAAGTCCTCTGTTTTGCTTGATGTGAAGCCTTGGGATGACGAGACAGATATGAAGAAGCTGGAAGAGGCTGTTCGTTCCATTGAGATGCCCGGGCTTCTGTGGGGAGCATCCAAACTGGTGCCGGTTGGTTACGGTATTAAGAAGATGCAGATCATGATGACCATTGTTGACGACCTGGTCTCTGTGGATTCCCTTATTGAGGAACATCTCACAGTTGAGCCATGCAGTGAGTATGTTCAAAGTTGTGACATTGTTGCGTTCAACAAAATCTAA 672 0.4866 MAVTLSGLHTESGLKSLNEFLFGKTYISGDQLTKDDIKVYAFVSKNPSDAFPNASKWYDAVSSRLAESFPGKAQGVKFSGQAAPAEASPAKAAAPADDDDDLDLFGDETEEEKAAAEAREATKKESSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIEMPGLLWGASKLVPVGYGIKKMQIMMTIVDDLVSVDSLIEEHLTVEPCSEYVQSCDIVAFNKI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1303g0007 223 SUPERFAMILY eEF-1beta-like 131 223 IPR036219 -
Prci1303g0007 223 SMART EF1_GNE_2 134 223 IPR014038 GO:0003746|GO:0006414
Prci1303g0007 223 MobiDBLite consensus disorder prediction 109 135 - -
Prci1303g0007 223 Gene3D - 127 223 IPR014717 -
Prci1303g0007 223 MobiDBLite consensus disorder prediction 77 135 - -
Prci1303g0007 223 Pfam EF-1 guanine nucleotide exchange domain 136 223 IPR014038 GO:0003746|GO:0006414
Prci1303g0007 223 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 212 223 IPR001326 GO:0003746|GO:0005853|GO:0006414
Prci1303g0007 223 FunFam Elongation factor 1-beta 1 like 128 223 - -
Prci1303g0007 223 SUPERFAMILY GST C-terminal domain-like 10 66 IPR036282 -
Prci1303g0007 223 CDD EF1B 137 223 IPR014038 GO:0003746|GO:0006414
Prci1303g0007 223 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 9 223 - -
Prci1303g0007 223 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 98 106 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1303g0007 1 223 Eukaryotic Initiation Factors Gene Family AT5G12110 73.246 1.27e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1303g0007 K03232 - cit:102619566 300.441