Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1303g0003 ATGTCAAGTGGAGCAACACATTGGTGTTATGAATGTGGACATCCGATTGTGCTTGAAGGGAGGGAAGTCATTTGCCCTTACTGTCATGAAGGCTTTGTGCAAGAACTCGAGATGCATGCCTCTCAACCATTTAATGCTATGGAAGAGTTTCATCGAATGCCCTACCTTTTTGATGCCATGCGTGCTTTCATGACGCAGAGAATGGCTGGGCCGTACCCAAACTTTGATATTAGAGAAAGGTCTGATACTGCACTATTTCCTGAATGGAGTCAAGATTTTTTCAATTCTGGCCCTTCTTTGATGTTTCATGGTCCTAGAGGGGATACTAGGCCTGTTGATTTCGGTGGTTTATTGATGGCCCCTGGACTCGAAGCATTCATTCAACAGCTGACTATGAATGATCACCAAGGTCCTCCTGCAGCCTCACATTCCTCGATCAATGCAATGCCTACCATTAAGATCACACGAGCACATCTTCACTCTGATTCACACTGTCCAGTCTGTAAAGAGAGATTCGAACTTGGGTCTGAGGCTAGGCAAATGCCCTGTAACCATATTTATCACTCTGACTGTATTGTTCCTTGTTGGTTCAGCACAACTCTTGTCCTGTTTGCCGTGTTGAGCTGCCAACTCCAGGACAGGGAAGTTCCAGTGGAGGAAGGAATGCCAGTAGCAGCAGGGACCGTGATAGCTTTAGGAGACAGGAGCACAACCAACAGGACCAAGGAAGGAGAAGCCAACTATCGGCATGGTGGCCATTCTAATCATCCTGCTCAAACACCACCATGA 789 0.4677 MSSGATHWCYECGHPIVLEGREVICPYCHEGFVQELEMHASQPFNAMEEFHRMPYLFDAMRAFMTQRMAGPYPNFDIRERSDTALFPEWSQDFFNSGPSLMFHGPRGDTRPVDFGGLLMAPGLEAFIQQLTMNDHQGPPAASHSSINAMPTIKITRAHLHSDSHCPVCKERFELGSEARQMPCNHIYHSDCIVPCWFSTTLVLFAVLSCQLQDREVPVEEGMPVAAGTVIALGDRSTTNRTKEGEANYRHGGHSNHPAQTPP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1303g0003 262 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 94 195 - -
Prci1303g0003 262 SUPERFAMILY RING/U-box 145 198 - -
Prci1303g0003 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 212 IPR013083 -
Prci1303g0003 262 MobiDBLite consensus disorder prediction 234 262 - -
Prci1303g0003 262 SMART ring_2 165 198 IPR001841 -
Prci1303g0003 262 Pfam RING-like zinc finger 165 192 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1303g0003 112 220 C3H Transcription Factor Family AT5G01980 35.135 1.69e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1303g0003 K11982 - gmx:100813674 254.988