Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2643 ATGGATATAACTTGTAGCTTACCGCAGTCAAGAATATTTGGTGGAGGGATCGGTTACAGACAAAAGTATAGTTTCGGTTCTTGCATGACATTCAGAAGATATTTTGGTTGTGCCTTCCTTGGCAACTCGAGTACTATTTTGAAAGCACGATTTAGTGGGATAAACTTAACTAGCAGTACTGCTTTTCGCAATGCTAGATTGGTTTCCGTGGGAGAGTTCAAAGTTTTGAATATGAAGAGAACTTGGTCTAGTAAGAAAAGTGATATTTCTATGGGATCCAAAGCAATTTGGGTAAAGTGTCAGGGTAATGATTCTTTGGCTTATGTTAATGGTAATGGTCGCAATGTAGATTATGTGAAAGGTTCTGGTGAGGAATTGGAATTAGGGCCTACTTCCAGTGCTGAACTGACTGTATCAGTGGAAGAGGAAGGGGGACATGAAGTAGAAGATGACACGCACAGTGTGGATGAACTTAAAGAATTATTGCAAAAGGCCTTGAAGGACTTAGAAGTTGCAAGAGTAAATAGTGCCATGTTCGAGGAGAAGGTTAAAAAAATTTCAGAGACTGCAATATCTTTGCAGGACGAAGCATCGAATGCTTTGAACAATATTAATTCTACTTTTGATGCTATCCAAGACATTGAGACTGAAGAATGTATAGCGAAAGAAGCTGTTCAAAAAGCAACTATGGCTCTTTCGTTGGCTGAGGCGAGGCTGCAAGTGGCCATCGAATCTATGGAGGTTGCAAAAGAGGAGCATGATTCTCTGCAAGGTTCTAATGAGAGTGATGGGGACAATGACATAACTGAAGAGGAGAAAGCACTTTTGGTTGCTCAAGAAGATCTCAAGGAATGCCTGACAAATTTAGAAAATTGTGAAGCAGCACTGAGACATTGGCAAAATAGAAAGGAGGAATTGCAGAATGAAGTGGAGAAGTTGAACGAACTTGCTGAAAAGGCACAGCTGAATGCATCAAAAGCAGAGGAGGATGTCACAAATATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACTCAACGAGTAAATGATGTTGAGATTGCCTTGCAGCGAGCAGAAAAATCCATTTTGAGTCCTAATGTTGATACCATAGAAACTATACAAGTACAAGACGCAGAGGGTATTTCTGAGGAGGAGAAAGAAGTTCAGGACTTTTCTGGTGATTTCATTGCTGAAGGGGATATAGATTTGCCAATTGATGATGAATCCTTGCTTCAGAAGCAATCACCAGAAATACTAACTGATAAAAGCAGCCAAAGTTTAGTAGAGTTAACTCACTCTGATTACTTGAGTGATCATGAGAACGTACAGTTAAACTTAGACTCTTCTGCAGAAGCTGAAACAGAAAGAGAGAAATTGAAGAATACCGTTCAGACAAAAAAACAGGAGACACAGAAAGATTTTACTAGAGATAGCTCACCCTTTGCTGCCAAAGGATTATTGAAGAAGTCATCCCGTTTCTTTTCTGCATCTTTTTTCTCTTTTTCAGTAGATGGAACTGAGTTCACACCAGCATCAGTTTTCCAGGGTTTTGTGGAATCTGTACAGAAGCAGTTACCTAAGATGGTTCTTGGGTTATTGTTAATGGGAGCAGGGGCTGCCTTTTTTGCCAATCGAGGAGAGAGGAACTCTCAGCTCTTTCAACAGCCAGAAGTCATTCCAAGCAGTGTTGAAGAAGTTTCCTCAAGTGCAAAGCCTCTGGTCAGACAACTTCAGAAACTTCCTAAGAGAATTAAGAAAATTATTGCATCATTACCTCAACAAGAGGTGAATGAAGAGGAAGCCTCTCTCTTGGACATGCTTTGGTTATTGTTAGCGAGTGTTATATTTGTGCCTATATTTCAAAAAATTCCTGGAGGGAGTCCTGTTCTCGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATCCGTCATGTTCATGGAACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTGTTGGTGACTGCTGTAGCTTTTGGCTTGGTGGCTCATTATGTTTGTGGTCTACCTGGCCCTGCTTCAATTGTTATTGGGAATGGTCTGGCATTATCATCCACTGCTGTTGTTCTACAAGTATTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGTCGAGCTACTTTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATCCCTCTTATTTCACCAAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCTATTGCTGAAGCTCTTGGGCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCTGGTGGACGATTACTCCTTCGACCAATATATAAGCAGATTGCCGAAAATCAGAATGCAGAAATATTTTCAGCCAATACTCTTCTTGTTATTCTTGGGACTAGTCTTCTTACTGCTAGGGCAGGACTTTCCATGGCACTTGGGGCATTTCTGGCTGGTTTACTTCTTGCAGAAACTGAATTTTCCTTACAGGTCGAATCTGATATTGCTCCATATCGTGGTCTTCTATTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAGCTTCTTCTGTCAAACTTTCCAGTCATCACAGGGACACTTGGACTCTTAATTTGTGGCAAGACAATATTGGTTTCTTTGATTGGAAGAAGCTTTGGGATTTCACTCATTTCTGCCCTTAGAGTTGGTCTCCTTCTTGCTCCTGGAGGGGAATTCGCGTTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGCATAATGTCTTCCCAACTTTCATCTTTGCTATTTCTTGTTGTGGGAATCTCTATGGCTCTCACACCATGGTTAGCTGCAGGCGGCCAGCTTATTGCTTCACGTTTTGAGGTGCATGATGTTCGAAGCTTATTACCTGTAGAAAGTGAGACGGATGATTTGCAAGATCACATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTTCTTTCTGAGCGACTGATACCTTTTGTTGCGCTAGATGTGAGAAGTGATAGAGTGGCAGTCGGTCGTGCTTTGGATCTCCCTGTATACTTTGGAGATGCCGGTAGTCGTGAGGTCCTGCACAAGATTGGGGCTGAAAGAGCATGTGCTGCGGCGGTAACTCTAGATTCTCCTGGTGCAAATTATCGAAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTGTTCGAGCTCATGATGTTGATCATGGCCTAAATTTGGAAAAGGCTGGAGCTACTGCTGTTGTACCTGAGACCCTGGAACCAAGTCTTCAACTAGCAGCTGCTGTTCTTGCTCAGCACAAATTAATTCCCTCTAGTATAGCAATCAGTTCAGTAATGGCTGGTGGAAAATTCCCACCATTTGAATTGAAGCCCAATATCCAGTCTGCATTGCTGTCACGGATAAGTCCACTGCACTTGCTGGAGCCATTCTTGTGGGAGCCATCAACATCAATCTGA 3600 0.4233 MDITCSLPQSRIFGGGIGYRQKYSFGSCMTFRRYFGCAFLGNSSTILKARFSGINLTSSTAFRNARLVSVGEFKVLNMKRTWSSKKSDISMGSKAIWVKCQGNDSLAYVNGNGRNVDYVKGSGEELELGPTSSAELTVSVEEEGGHEVEDDTHSVDELKELLQKALKDLEVARVNSAMFEEKVKKISETAISLQDEASNALNNINSTFDAIQDIETEECIAKEAVQKATMALSLAEARLQVAIESMEVAKEEHDSLQGSNESDGDNDITEEEKALLVAQEDLKECLTNLENCEAALRHWQNRKEELQNEVEKLNELAEKAQLNASKAEEDVTNIMLLAEQAVAFELEATQRVNDVEIALQRAEKSILSPNVDTIETIQVQDAEGISEEEKEVQDFSGDFIAEGDIDLPIDDESLLQKQSPEILTDKSSQSLVELTHSDYLSDHENVQLNLDSSAEAETEREKLKNTVQTKKQETQKDFTRDSSPFAAKGLLKKSSRFFSASFFSFSVDGTEFTPASVFQGFVESVQKQLPKMVLGLLLMGAGAAFFANRGERNSQLFQQPEVIPSSVEEVSSSAKPLVRQLQKLPKRIKKIIASLPQQEVNEEEASLLDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVAFGLVAHYVCGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVITGTLGLLICGKTILVSLIGRSFGISLISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEVHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAVTLDSPGANYRNSLGSEQVLPKCEDFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQHKLIPSSIAISSVMAGGKFPPFELKPNIQSALLSRISPLHLLEPFLWEPSTSI 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2643 1199 ProSiteProfiles RCK N-terminal domain profile. 1015 1137 IPR003148 GO:0006813
Prci12g2643 1199 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 189 1155 - -
Prci12g2643 1199 Pfam Sodium/hydrogen exchanger family 613 983 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci12g2643 1199 Gene3D - 603 989 IPR038770 -
Prci12g2643 1199 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1012 1146 IPR036291 -
Prci12g2643 1199 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 614 894 IPR004771 GO:0006812|GO:0008324|GO:0016020
Prci12g2643 1199 FunFam K(+) efflux antiporter 2 chloroplastic 603 989 - -
Prci12g2643 1199 Coils Coil 453 473 - -
Prci12g2643 1199 Gene3D - 1011 1158 - -
Prci12g2643 1199 MobiDBLite consensus disorder prediction 454 478 - -
Prci12g2643 1199 Coils Coil 155 175 - -
Prci12g2643 1199 MobiDBLite consensus disorder prediction 453 479 - -
Prci12g2643 1199 Coils Coil 232 252 - -
Prci12g2643 1199 Pfam TrkA-N domain 1016 1129 IPR003148 GO:0006813
Prci12g2643 1199 Coils Coil 282 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2643 Prci-Chr12 43870862 43895274 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2643 1 1136 Inorganic Solute Cotransporters AT4G00630 65.082 0.0 1323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2643 K03455 - gmx:100798822 1585.08