Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2642 ATGGATATAACTTGTAGCTTACCGCAGTCAAGAATATTTGGTGGAGGGATCGGTTACAGACAAAAGTATAGTTTCGGTTCTTGCATGACATTCAGAAGATATTTTGGTTGTGCCTTCCTTGGCAACTCGAGTACTATTTTGAAAGCACGATTTAGTGGGATAAACTTAACTAGCAGTACTGCTTTTCGCAATGCTAGATTGGTTTCCGTGGGAGAGTTCAAAGTTTTGAATATGAAGAGAACTTGGTCTAGTAAGAAAAGTGATATTTCTATGGGATCCAAAGCAATTTGGGTAAAGTGTCAGGGTAATGATTCTTTGGCTTATGTTAATGGTAATGGTCGCAATGTAGATTATGTGAAAGGTTCTGGTGAGGAATTGGAATTAGGGCCTACTTCCAGTGCTGAACTGACTGTATCAGTGGAAGAGGAAGGGGGACATGAAGTAGAAGATGACACGCACAGTGTGGATGAACTTAAAGAATTATTGCAAAAGGCCTTGAAGGACTTAGAAGTTGCAAGAGTAAATAGTGCCATGTTCGAGGAGAAGGTTAAAAAAATTTCAGAGACTGCAATATCTTTGCAGGACGAAGCATCGAATGCTTTGAACAATATTAATTCTACTTTTGATGCTATCCAAGACATTGAGACTGAAGAATGTATAGCGAAAGAAGCTGTTCAAAAAGCAACTATGGCTCTTTCGTTGGCTGAGGCGAGGCTGCAAGTGGCCATCGAATCTATGGAGGTTGCAAAAGAGGAGCATGATTCTCTGCAAGGTTCTAATGAGAGTGATGGGGACAATGACATAACTGAAGAGGAGAAAGCACTTTTGGTTGCTCAAGAAGATCTCAAGGAATGCCTGACAAATTTAGAAAATTGTGAAGCAGCACTGAGACATTGGCAAAATAGAAAGGAGGAATTGCAGAATGAAGTGGAGAAGTTGAACGAACTTGCTGAAAAGGCACAGCTGAATGCATCAAAAGCAGAGGAGGATGTCACAAATATAATGCTTTTAGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACTCAACGAGTAAATGATGTTGAGATTGCCTTGCAGCGAGCAGAAAAATCCATTTTGAGTCCTAATGTTGATACCATAGAAACTATACAAGTACAAGACGCAGAGGGTATTTCTGAGGAGGAGAAAGAAGTTCAGGACTTTTCTGGTGATTTCATTGCTGAAGGGGATATAGATTTGCCAATTGATGATGAATCCTTGCTTCAGAAGCAATCACCAGAAATACTAACTGATAAAAGCAGCCAAAGTTTAGTAGAGTTAACTCACTCTGATTACTTGAGTGATCATGAGAACGTACAGTTAAACTTAGACTCTTCTGCAGAAGCTGAAACAGAAAGAGAGAAATTGAAGAATACCGTTCAGACAAAAAAACAGGAGACACAGAAAGATTTTACTAGAGATAGCTCACCCTTTGCTGCCAAAGGATTATTGAAGAAGTCATCCCGTTTCTTTTCTGCATCTTTTTTCTCTTTTTCAGTAGATGGAACTGAGTTCACACCAGCATCAGTTTTCCAGGGTTTTGTGGAATCTGTACAGAAGCAGTTACCTAAGATGGTTCTTGGGTTATTGTTAATGGGAGCAGGGGCTGCCTTTTTTGCCAATCGAGGAGAGAGGAACTCTCAGCTCTTTCAACAGCCAGAAGTCATTCCAAGCAGTGTTGAAGAAGTTTCCTCAAGTGCAAAGCCTCTGGTCAGACAACTTCAGAAACTTCCTAAGAGAATTAAGAAAATTATTGCATCATTACCTCAACAAGAGGTGAATGAAGAGGAAGCCTCTCTCTTGGACATGCTTTGGTTATTGTTAGCGAGTGTTATATTTGTGCCTATATTTCAAAAAATTCCTGGAGGGAGTCCTGTTCTCGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCCATCATCCGTCATGTTCATGGAACAAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCTCAGGTGTTGGTGACTGCTGTAGCTTTTGGCTTGGTGGCTCATTATGTTTGTGGTCTACCTGGCCCTGCTTCAATTGTTATTGGGAATGGTCTGGCATTATCATCCACTGCTGTTGTTCTACAAGTATTGCAGGAGAGAGGTGAGAGCACATCACGGCATGGTCGAGCTACTTTTTCTGTTTTACTTTTTCAGGATTTGGCTGTTGTGGTCTTGCTAATACTCATCCCTCTTATTTCACCAAATTCTTCCAAAGGAGGGGTTGGTTTCCAAGCTATTGCTGAAGCTCTTGGGCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCTGGTGGACGATTACTCCTTCGACCAATATATAAGCAGATTGCCGAAAATCAGAATGCAGAAATATTTTCAGCCAATACTCTTCTTGTTATTCTTGGGACTAGTCTTCTTACTGCTAGGGCAGGACTTTCCATGGCACTTGGGGCATTTCTGGCTGGTTTACTTCTTGCAGAAACTGAATTTTCCTTACAGGTCGAATCTGATATTGCTCCATATCGTGGTCTTCTATTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAGCTTCTTCTGTCAAACTTTCCAGTCATCACAGGGACACTTGGACTCTTAATTTGTGGCAAGACAATATTGGTTTCTTTGATTGGAAGAAGCTTTGGGATTTCACTCATTTCTGCCCTTAGAGTTGGTCTCCTTCTTGCTCCTGGAGGGGAATTCGCGTTTGTGGCTTTTGGCGAAGCTGTTAATCAGGGCATAATGTCTTCCCAACTTTCATCTTTGCTATTTCTTGTTGTGGGAATCTCTATGGCTCTCACACCATGGTTAGCTGCAGGCGGCCAGCTTATTGCTTCACGTTTTGAGGTGCATGATGTTCGAAGCTTATTACCTGTAGAAAGTGAGACGGATGATTTGCAAGATCACATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCTCAACTTCTTTCTGAGCGACTGATACCTTTTGTTGCGCTAGATGTGAGAAGTGATAGAGTGGCAGTCGGTCGTGCTTTGGATCTCCCTGTATACTTTGGAGATGCCGGTAGTCGTGAGGTCCTGCACAAGATTGGGGCTGAAAGAGCATGTGCTGCAGCGGTAACTCTAGATTCTCCTGGTGCAAATTATCGAACAGTTTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGAGCTCATGATGTTGATCATGGCCTAAATTTGGAAAAGGCTGGAGCTACTGCTGTTGTACCTGAGACCCTGGAACCAAGTCTTCAACTAGCAGCTGCTGTTCTTGCTCAGGCTAAACTTCCCACGTCAGAGATTGCATCGGCTATAAATGAATTCAGATCCCGGCATCTGGCTGAGCTTGCTGAGCTGTGTGAAGCAAGTGGCAGTTCTCTTGGTTATGGATTTAACCGAACAGCGAGCAAATCCAAATCTCAATCCTTAGATTCACTGGATGATAACCAAATCTCTGAAGGGACACTGGCAATATGA 3636 0.4238 MDITCSLPQSRIFGGGIGYRQKYSFGSCMTFRRYFGCAFLGNSSTILKARFSGINLTSSTAFRNARLVSVGEFKVLNMKRTWSSKKSDISMGSKAIWVKCQGNDSLAYVNGNGRNVDYVKGSGEELELGPTSSAELTVSVEEEGGHEVEDDTHSVDELKELLQKALKDLEVARVNSAMFEEKVKKISETAISLQDEASNALNNINSTFDAIQDIETEECIAKEAVQKATMALSLAEARLQVAIESMEVAKEEHDSLQGSNESDGDNDITEEEKALLVAQEDLKECLTNLENCEAALRHWQNRKEELQNEVEKLNELAEKAQLNASKAEEDVTNIMLLAEQAVAFELEATQRVNDVEIALQRAEKSILSPNVDTIETIQVQDAEGISEEEKEVQDFSGDFIAEGDIDLPIDDESLLQKQSPEILTDKSSQSLVELTHSDYLSDHENVQLNLDSSAEAETEREKLKNTVQTKKQETQKDFTRDSSPFAAKGLLKKSSRFFSASFFSFSVDGTEFTPASVFQGFVESVQKQLPKMVLGLLLMGAGAAFFANRGERNSQLFQQPEVIPSSVEEVSSSAKPLVRQLQKLPKRIKKIIASLPQQEVNEEEASLLDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVAFGLVAHYVCGLPGPASIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVITGTLGLLICGKTILVSLIGRSFGISLISALRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASRFEVHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAVTLDSPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIASAINEFRSRHLAELAELCEASGSSLGYGFNRTASKSKSQSLDSLDDNQISEGTLAI 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2642 1211 Gene3D - 603 989 IPR038770 -
Prci12g2642 1211 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 189 1202 - -
Prci12g2642 1211 FunFam K(+) efflux antiporter 2 chloroplastic 603 989 - -
Prci12g2642 1211 Coils Coil 453 473 - -
Prci12g2642 1211 MobiDBLite consensus disorder prediction 454 478 - -
Prci12g2642 1211 Coils Coil 155 175 - -
Prci12g2642 1211 MobiDBLite consensus disorder prediction 453 479 - -
Prci12g2642 1211 Pfam TrkA-N domain 1016 1129 IPR003148 GO:0006813
Prci12g2642 1211 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 614 894 IPR004771 GO:0006812|GO:0008324|GO:0016020
Prci12g2642 1211 Coils Coil 232 252 - -
Prci12g2642 1211 Gene3D - 1011 1175 - -
Prci12g2642 1211 ProSiteProfiles RCK N-terminal domain profile. 1015 1137 IPR003148 GO:0006813
Prci12g2642 1211 Pfam Sodium/hydrogen exchanger family 613 983 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Prci12g2642 1211 Coils Coil 282 330 - -
Prci12g2642 1211 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1012 1153 IPR036291 -
Prci12g2642 1211 FunFam K(+) efflux antiporter 2 chloroplastic 1011 1175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2642 Prci-Chr12 43850784 43895271 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2642 1 1211 Inorganic Solute Cotransporters AT4G00630 66.991 0.0 1443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2642 K03455 - gmx:100798822 1695.25