Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2621 ATGAGAATTGCTGTTAAGCGGTTCAATAGAAATGCTTGGCCTGATGCCAGCCAAATTTTGGAGGAGGCAAGGTCAGTTGGTCAGCTCCGTAACCAAAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAAGGTGATGAGAGGTTGCTTGTGGCTGAATATATGCCAAATGAAACACTTGCCAAACACCTTTTTCATTGGGAAACACAACCTATGAAATGGGCAATGCGATTGAGAGTCGTTCTATATATTGTGCAAGCTCTAGAATACTGCACAAGTAAAGGGCGTGCTCTCTATCACGACCTTAATGCATATAGGGTTCTTTTTGATGAGGATGGTAATCCTAGGCTTTCAAGTTTTGGCCTCATGAAGAATAATAGGGTCGGGAAAAGTTACAGCACGAATTTGGCCTTTACCCCACCAGAGTATCTGAGAACTGGGAGAGTAACTCCAGAAAGTGTAATTTATAGCTTTGGTACTCTTTTACTTGATCTTCTTAGCGGGAAGCACATCCCCCCAAGCCATGCCCTTGACTTGATTCGGGACAGAAATCTTCAGCTGCTGACAGACTCTTTTGTGGAAGGACAGTTTTCTGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGTCTACAGTATGAACCTAGAGAACGGCCAAATCCCAAGTCACTTGTGGCCGCATTGGCGCCACTTCAGAAAGAAACAGAGGTTCCTTCACATGTCTTGATGGGTGTTCCACACAGCACTACTTTCGCTTCATTCTCCCCACTTGGTGAAGCATGCTCAAGAAAAGACTTGACTGCTATACATGAAGTTCTGGAAAATATTGGCTATAAAGATGATGAAGGAGTGACAAACGAGTTATCATTCCAAATGTGGACTGATCAAATGCAGGACTCGCTAAATTGTAAGAAAAAGGGGGATGTTGCTTTCCGGCAGAAAGATTTCCGACTTGCTATTGAGTGTTACACACAGTTCATTGATGCTGGAACAATGGTTTCTCCAACAGTCTATGCACGGCGCAGTTTATGCTATCTGATAAGTGACATGCCTCAAGAAGCTCTGAATGATGCAATGCAAGCACAAATTATCTCTCCGGTATGGCAAATTGCATCATATCTTCAATCGGTGGCTCTCGCCAAGATTGGGATGGAGAATGAAGCTCAAGTAGCACTTAAAGAGGGCACAACACTGGAAGCCAAGCGAAATGCAGCTAATGGATCAAAGTGA 1233 0.438 MRIAVKRFNRNAWPDASQILEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLYIVQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNNRVGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQLLTDSFVEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGVPHSTTFASFSPLGEACSRKDLTAIHEVLENIGYKDDEGVTNELSFQMWTDQMQDSLNCKKKGDVAFRQKDFRLAIECYTQFIDAGTMVSPTVYARRSLCYLISDMPQEALNDAMQAQIISPVWQIASYLQSVALAKIGMENEAQVALKEGTTLEAKRNAANGSK 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2621 410 FunFam probable serine/threonine-protein kinase At5g41260 55 246 - -
Prci12g2621 410 SUPERFAMILY Protein kinase-like (PK-like) 2 238 IPR011009 -
Prci12g2621 410 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2621 410 Gene3D Tetratricopeptide repeat domain 300 409 IPR011990 GO:0005515
Prci12g2621 410 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 2 404 IPR045845 GO:0004672|GO:0009742
Prci12g2621 410 SUPERFAMILY TPR-like 300 400 IPR011990 GO:0005515
Prci12g2621 410 Gene3D Transferase(Phosphotransferase) domain 1 55 247 - -
Prci12g2621 410 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Prci12g2621 410 FunFam probable serine/threonine-protein kinase At4g35230 299 408 - -
Prci12g2621 410 Pfam Protein tyrosine and serine/threonine kinase 2 228 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2621 Prci-Chr12 43639079 43645182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2621 1 232 Glycoside Hydrolase AT3G07070 32.819 4.76e-34 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Prci12g2621 PK_Tyr_Ser-Thr 3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2621 K14500 - gmx:100781311 761.525