Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2612 ATGGCAACTGATATGCAGAAGCTAATTGGAACAAGTGAAGATGATGAGGAAGAAATGGGAATGGATGTGAAAGAGGAGGATGATGATGATGATGAAAGAGACTGTGCTAATCATGGTGATGCTCCAGTGATGGTAGACGTTGATGGTGGGATGGGAACTGTTAGTGGTAACAATACTTTTCAACAGCACCAGCAATTTCAAGAACAAGCGAGTACTCCAGGTGGGGGTACTCGAAGGTGTAGGCCTCTAGAAGAGAAAGAGAGAACAAAGATAAGAGAGAGGCATCGTAGGGCTATAACTGCTAGGATTTTGGCAGGCCTTCGGAGGCATGGCAACTATAATCTTAGAGTTAGAGCTGACATAAATGATGTCATTGCTGCTCTGGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGCACTACTTTTCCTTCGAGATCTCAGGGTCAGAGGCCAGCTGGTGGTACTTCTACTGTGGTGACATCATCAGCTTCCCATATGGCTTCACAACAGGCTACACTTGCTTCCCTAAAGGGAGCCACTTCAGGCTACAGGAGCTCTGCAGAGTATAATGCAAGTCGATTGAAAGGTGTTTTTATGCCAGCTCCATCACCTTATGATCTAACCCAAGGTTCCCAGTCTCAATCATCGTCTATGATGGGGAGTGGAGAAGAACAGAGGGACAACCATCCTCTCATTGGCTGTTCAACGCATAATGTTGAGGAGAAGCAGATTGTGGACATGCCCCACAGATTACCTGAGCGTGATTTTGCTGGTACCCCATTTGTTCCAGTTTATGTGATGCTACCGTTGGGTGTCATTAATATGAAGTGTGAACTTGTTGATCTGGATGGTCTCTTAAAGCAGCTGAGGGTGTTGAAATCGTTGCATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGCATAGTGGAGGCGCATGCCCCTCTGGAGTATAATTGGAATGGTTACAAGAAACTTTTTCAGATGGTACGTGAACTTAAGCTTAAGTTGCAGGTTGTGATGTCTTTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCAATACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTAACATTTTTTTCACTGATAGAGAGGGAAGGCACAACCCTGAATGCCTTTCCTGGGGAATAGATAAGGAACGGGTTTTAAGAGGTCGAACTGCTTTAGAGGTTTATTTTGACTTCATGAGAAGCTTCAGGGTAGAGTTTGATGAGTATTTTGAGGATGGTATAATCTCCATGATTGAAGTTGGACTTGGTCCATGTGGGGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAATATTTGTTAAAAAGCCTTCGGAAGGCGGCTGAAACAAGGGGACACCCCACATGGGCTAGAGGACCAGATAATGCTGGTACCTATAACTCGCAACCACATGAAACAGGTTTCTTTTGTGATGGAGGAGATTATGATGGTTACTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTGGTTGATCATGGAAATTCTGTACTTTCTCTGGCAAAATTAGCCTTTGAGGGAACCTGCATTGCTGCAAAGCTATCAGGTATTCATTGGTGTTACAAGACAGTGAGCCATGCTGCCGAATTAACTGCCGGGTTTTATAACCCATGCAATCGTGATGGTTATGCTGCAATCATGACAATGCTAAAGAAGAATGGTGCAAGTTTAAGCTTAGCTTGCGCTGACCTGCACTCATTGAACCAGCACGAGGACTTTCCAGGGGCATTTTCAGATCCTGAGGGATTAGTCTGGCAGGTGTTGAATGCAGCTTGGGATGTTTGCCTCCCCATTTCAAGTGAGAACGCACTTCCTTGCCTAAGTAGAGTTGGCTATAATAAGATTTTGGATAACGCCAAGCCCATGAATGATCCAGATGGAAAACATTTTACATCGTTTACTTACCTGAGACTAAGTCCACTTCTTATGGAAAGACATAACTTCTTAGAGTTCGAACGATTTGTGAAGAGAATGCATGGGGAAGCCGTTCTTGATCTCCAGGCATAG 2103 0.4451 MATDMQKLIGTSEDDEEEMGMDVKEEDDDDDERDCANHGDAPVMVDVDGGMGTVSGNNTFQQHQQFQEQASTPGGGTRRCRPLEEKERTKIRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQRPAGGTSTVVTSSASHMASQQATLASLKGATSGYRSSAEYNASRLKGVFMPAPSPYDLTQGSQSQSSSMMGSGEEQRDNHPLIGCSTHNVEEKQIVDMPHRLPERDFAGTPFVPVYVMLPLGVINMKCELVDLDGLLKQLRVLKSLHVDGVMVDCWWGIVEAHAPLEYNWNGYKKLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPIPHWVAEIGRSNPNIFFTDREGRHNPECLSWGIDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDGIISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYLLKSLRKAAETRGHPTWARGPDNAGTYNSQPHETGFFCDGGDYDGYYGRFFLSWYSQVLVDHGNSVLSLAKLAFEGTCIAAKLSGIHWCYKTVSHAAELTAGFYNPCNRDGYAAIMTMLKKNGASLSLACADLHSLNQHEDFPGAFSDPEGLVWQVLNAAWDVCLPISSENALPCLSRVGYNKILDNAKPMNDPDGKHFTSFTYLRLSPLLMERHNFLEFERFVKRMHGEAVLDLQA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2612 700 Gene3D Glycosidases 254 699 - -
Prci12g2612 700 MobiDBLite consensus disorder prediction 15 34 - -
Prci12g2612 700 Pfam BES1/BZR1 plant transcription factor, N-terminal 76 211 IPR008540 -
Prci12g2612 700 SUPERFAMILY (Trans)glycosidases 258 695 IPR017853 -
Prci12g2612 700 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 209 693 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 Pfam Glycosyl hydrolase family 14 266 684 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 540 556 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 506 525 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 433 455 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 297 311 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 615 637 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 318 336 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 557 568 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 575 598 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 340 361 IPR001554 GO:0000272|GO:0016161
Prci12g2612 700 MobiDBLite consensus disorder prediction 142 164 - -
Prci12g2612 700 MobiDBLite consensus disorder prediction 206 224 - -
Prci12g2612 700 PRINTS Plant beta-amylase signature 666 680 IPR001371 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Plant beta-amylase signature 681 695 IPR001371 GO:0000272|GO:0016161
Prci12g2612 700 PRINTS Plant beta-amylase signature 423 432 IPR001371 GO:0000272|GO:0016161
Prci12g2612 700 MobiDBLite consensus disorder prediction 206 228 - -
Prci12g2612 700 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2612 Prci-Chr12 43608106 43615612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2612 1 697 Glycoside Hydrolase AT2G45880 66.524 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Prci12g2612 Glyco_hydro_14 2e-102 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2612 K01177 - gmx:100805560 1145.18