Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2597 ATGGATAAGGAGCAAACCCCCAAAATTACCAGAAGAACAACCAGATCCGTGGCTACGGCATCTAGTTCAGATAATGTCATGACTGAAGTAACTAATTTTGGTCTTCCACCAGCAATAAATCATGTCATAGTTGAAGGAGATCCAGAAGTGGATAAGGAGGAAACCCTACAAATTCCCAGAAGAACAACCAGATCTTTAGCTTTGGCATCTAATTCAGATAATGTTGCTATGAAAGTAACTGACATTGACCCTCCTACCATAAATGACCTTTTAGTTGGAGGAGATCCCATTAGTTTGGATGATTTAATATCTACTTTTCCTGGTAGGTGTAACCAGATTCTTGAGCTTGTGCGTCTTTTGGGACCTTTGAATTCACCGATATTGCCTTTATTTGTGTATGGTGGTCCTTCTACTGGAAAAACCAGTATCATTCTTCAATTATTTGGGCATCTCAACAGGCCTCTTGTTTATTCAAGCTGTAGGACATGCTATAATCAGCGGATCTTGTTTGAATCTATTTTGAATTCATTGGTTCTTCACAGAAAAAGTGCTTCCAATGGTTATTCAAATGCAAAACGATGTGAAAGACCATCCGACTTTGTCAATTTTCTTAGGGAAGCATTGGTCAATGTGATAAATAATTTGAAGGCAAATTCAGAGAAATTGAGATCGAATAAGATGGCAGCAAGGGGAACTGGGAATATGATTTACTTGGTATTTGACAATTTTCATCTTGTTAGGGAGTGGGATAAGAGTTCTACTATATTACCCTTCCTGTTTAATCTTTATGATCTGCTAAACTTGCCAGAGGTAGGCTTGATTTTTATCAGCAGCACCTCCCCTGATTCCTATTATACTAATATGGGTTATGTGGAACCTGTCCCCGTCTTCTTTCCTGATTATACAGAGTCTGATCTTCGTAAAATATTTTTGAGAAACCAAGCAAACCAAAAGTTGTACTCTTCATTTCTGGATGTAGTTTTGAGGCCTTTCTGTAGAATTACAAGACAGGTGGATGAATTGTTTACTGCCTTCAAGTCACTATTTGAAAAATATTGCGAACCTTTGAGTGATCATGGTGTTATTCCAAGTGAAGACATGAAGAGAAGGTTATTCAGCCATCTCAAGCCTCATATTGGTACCTATTTGAATGAAATATTTAAGGTTTCATCTCTTCCTTCACTTGAAGTTGAGACCCATAAAGAGACCAAACAGAAGGGGAATCCCAAGAAATTGGAGCGATCTGACGGAACTGCAGAGCTGGAATTTCACATGTCGATTTGTGCTAAATATCTCCTTATTTCTGCATTTCTTGCATCCAGAAACCCTGCAACCCTTGATGACTCACTTTTTGATTCGACTGGTGGATCAAACAGTCGAAAGCATAAGAGGAAGACCTCTACGAAAGTGCAGGAACAGAAACAAAGTGCAGAAGAGGAACTATTAATGAAAGGACCTGGAACTTTTCCACTAGAGAGGTTGTTAGCCATCTTCCAATGTATTGTGTCAGTTGCAGAAGATCCATCTGACGAAGAGGGACAAAGGAATGATGGATTAGGAATCCAAGGTTGCAATGGTGGGCTAATGTCCGATGTTCTGTTCCAACTATCCACACTCTGCAATGCTAATTTTATTGTTAGAGGAGGAAGCTGTCCGATTGAAGGCTCTACTCGGTATCGATCTACTATATCTGAAGACCTGGCTTTGAAGGTTGCGAGGAGCCTCAAATTCCCGCTGTCCAAGTATTTGTATAGAAGATAA 1761 0.3952 MDKEQTPKITRRTTRSVATASSSDNVMTEVTNFGLPPAINHVIVEGDPEVDKEETLQIPRRTTRSLALASNSDNVAMKVTDIDPPTINDLLVGGDPISLDDLISTFPGRCNQILELVRLLGPLNSPILPLFVYGGPSTGKTSIILQLFGHLNRPLVYSSCRTCYNQRILFESILNSLVLHRKSASNGYSNAKRCERPSDFVNFLREALVNVINNLKANSEKLRSNKMAARGTGNMIYLVFDNFHLVREWDKSSTILPFLFNLYDLLNLPEVGLIFISSTSPDSYYTNMGYVEPVPVFFPDYTESDLRKIFLRNQANQKLYSSFLDVVLRPFCRITRQVDELFTAFKSLFEKYCEPLSDHGVIPSEDMKRRLFSHLKPHIGTYLNEIFKVSSLPSLEVETHKETKQKGNPKKLERSDGTAELEFHMSICAKYLLISAFLASRNPATLDDSLFDSTGGSNSRKHKRKTSTKVQEQKQSAEEELLMKGPGTFPLERLLAIFQCIVSVAEDPSDEEGQRNDGLGIQGCNGGLMSDVLFQLSTLCNANFIVRGGSCPIEGSTRYRSTISEDLALKVARSLKFPLSKYLYRR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2597 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 370 IPR027417 -
Prci12g2597 586 Pfam AAA ATPase domain 106 262 IPR041664 -
Prci12g2597 586 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 296 583 IPR047088 -
Prci12g2597 586 Coils Coil 205 232 - -
Prci12g2597 586 FunFam Origin of replication complex subunit 5 106 287 - -
Prci12g2597 586 MobiDBLite consensus disorder prediction 450 478 - -
Prci12g2597 586 Coils Coil 460 480 - -
Prci12g2597 586 MobiDBLite consensus disorder prediction 1 23 - -
Prci12g2597 586 Gene3D - 106 284 IPR027417 -
Prci12g2597 586 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 98 585 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2597 Prci-Chr12 43453605 43462140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2597 52 586 Core DNA Replication Machinery Family AT4G29910 58.364 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2597 K02607 - qsa:O6P43_017636 820.461