Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2592 ATGGCAAGGTGGTCGATACCAAATGATGGGCTTGTTATAGATATTACTGAAACCCCTAAAAGGTTTGAACATGATAGAATCTTTATTGATCTAGAACTATTTTCAGAAGCTCATGGGGCCAAATTTGAGGGAGACCAGGATTGTAGAGTCGATAAAGTTATATCTGATAAGGTCCAATGCTTATTTGATCAATTTCTTATCGAGTTTTTGAAGGAGATGCATGCCCATAATTCTTTTCGACCTATCCCACCAATGCTTGGTAATGGGCAACCCGTGAATTTGAAAACCTTGTTCTTAGTTGTGATAGGGAAAGGAGGGTATGATGTAGTCTCCAAAAAAAATTTATGGAATTTAGTGGCCGAAAAATTTGGGTTAGGTTTAAACATTGGTTCATCAGCAAAGTTGATCTATTCTAAGTATTTAGGCACTTTAGAGACATGGCTCATAAATGTTTCTGAGGGTAAGGTACTTGGTTGTAGTTTGATGGATGGTGCAATCAACTTTGATCGGCAACTAATGACGGGACTTCAAGCTAAAATAAAAAGGCTCTTGTCAGAATGGTGTAAATTGTTTGATACTAATGGAGTTGAGAGTAAAGTTCAGGATAGTACGTTTGTTGGGTTGGATATGTCAAGAAACTCGTTCAACATTGATGACACAAAGACACTGAAGGAGTTTGATAGAATGAAGATCACTGCAAAGAAACTAGTAAATGCATTAGATATAGGGGACTCATCTAATAATAATAGAGTAAACAACGTGCCTAATTTGTCTAATAGAGGCAAGGGATTTGACAATGACGATGATGTCTTGATATTAGATCCATCTACTGTTAAGAAGGAGAACTATGGGCGTAAGAGGAAAAGAAAGTCTATGCAAGAAATGCTATGTTGGGTAACTAGCATTGCAAAGAATCCACGTGATCTTATAGCTTGTCCAATACTTGAAAGATCAAAGTGGAGTTCTCAAAGTAATGAGGAGGTCAAGAAGCAAGTTTTGTTGTTTCGAGAGGCTGTCTTTGTGAAAAGAAATTTTGAATCAAGCAAAGAACATAATGATTGGCAGGGTATAAAGATGCATCCTTGCATGTATGAAGATCACTCGAGGACAACTTGTAATGTTAAGGAAAGGTTGAAGTGTGAAAACAGGAGGCTTTCATGTGAAAAGTCCATATCTATTGTACCAGTCTCATCAAAAATTTCCATAGGAACTCTAAGTGATTCAAAGAATACTCAAAGTCCGCTCATTGATCATAAAGATCAAGTTGAGAAAACTACACTTTTATCCTTTGATAAATGTAGCAAAATAACCGTCCCTCTAGGGCCATCTCATCAGGCTTTAGTACCAGAATGGACTGGTGTGATTTTTGAAAGTGATCCTAAATGGTTAGGTACCCAAATATGGCCATCAAAAAGTGTAAATCATCATAGACAAGTCATCCAAAGGGATCCTAGTGGAAAGGGAAGAAATGACTTTTGTAACTGTCAAGTACCAGGATCAGTGGAGTGTCTCAAATTTCACATTGTTGAAAATAGAGACAAAATTAAATTGGAATTAGATGTGGCTTTTTATCAATGGAATTTCCATAAGGTTGGGGAGCAAGTTAGCCATCATTGGACGTATGAAGAAGAGAAAAAATTCAAGAATGCGTTGCGAGCTAACCTCCAATCACGCAAGAAATGTCATTGGGATCATATTTTCAGATCATATCCGAAGAAAAAACGAGAAGATTTGGTCAGCTACTACTTTAATGTTTTTGTTTTGCGACGTCGAAGACAACAGAATCAATATTCTCCGAATAATATTGACAGTGATGATGATGGATTAGAGTCAGAACCACCGATCAAAGCCAAAGCAATTCGCTCAGTTGTTATGAAAAAATAA 1884 0.3694 MARWSIPNDGLVIDITETPKRFEHDRIFIDLELFSEAHGAKFEGDQDCRVDKVISDKVQCLFDQFLIEFLKEMHAHNSFRPIPPMLGNGQPVNLKTLFLVVIGKGGYDVVSKKNLWNLVAEKFGLGLNIGSSAKLIYSKYLGTLETWLINVSEGKVLGCSLMDGAINFDRQLMTGLQAKIKRLLSEWCKLFDTNGVESKVQDSTFVGLDMSRNSFNIDDTKTLKEFDRMKITAKKLVNALDIGDSSNNNRVNNVPNLSNRGKGFDNDDDVLILDPSTVKKENYGRKRKRKSMQEMLCWVTSIAKNPRDLIACPILERSKWSSQSNEEVKKQVLLFREAVFVKRNFESSKEHNDWQGIKMHPCMYEDHSRTTCNVKERLKCENRRLSCEKSISIVPVSSKISIGTLSDSKNTQSPLIDHKDQVEKTTLLSFDKCSKITVPLGPSHQALVPEWTGVIFESDPKWLGTQIWPSKSVNHHRQVIQRDPSGKGRNDFCNCQVPGSVECLKFHIVENRDKIKLELDVAFYQWNFHKVGEQVSHHWTYEEEKKFKNALRANLQSRKKCHWDHIFRSYPKKKREDLVSYYFNVFVLRRRRQQNQYSPNNIDSDDDGLESEPPIKAKAIRSVVMKK 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2592 627 CDD ARID 62 145 - -
Prci12g2592 627 SMART ARID_2 53 145 - -
Prci12g2592 627 SUPERFAMILY ARID-like 62 155 IPR036431 GO:0003677
Prci12g2592 627 SMART bright_3 57 150 IPR001606 GO:0003677
Prci12g2592 627 ProSiteProfiles ARID domain profile. 56 149 IPR001606 GO:0003677
Prci12g2592 627 CDD SANT 539 586 IPR001005 -
Prci12g2592 627 Gene3D - 45 156 IPR036431 GO:0003677
Prci12g2592 627 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 54 612 - -
Prci12g2592 627 Pfam ARID/BRIGHT DNA binding domain 69 144 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2592 Prci-Chr12 43401347 43404035 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Prci12g2592 ARID 3.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2592 - - pcin:129289383 1271.14