Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2586 ATGGCTGGAACAAGGTTTTCCTATCTGAAACGTCTCCAGAAATATTCAGTTAAGGGTTCTTTTAACGTGGAATTAGTTCAACCAAATAAACATATTATGAACCTTACAAGGTGCATGGATTGCGTTCATTCAAGATTTCTGAGCAATTCATTCAGTCAAGCTTATTCCAAAAGAGAGTCACAGTTACCTGAGCATATAGCCAAGAACCAGTTCAGAACTATGACGTATGGAAGCAGCAACCCCTTCAATACCAAACCCGGGGATTCTTTTTCTCCTAAATTTTCTAGTTTTTCTCTCCACAAGGCTCTCCCTTTTGCTTCAATGACCCTCTTGTTGAATCATCGACCGTATTCATCATCTCTGAGCGGCAAGGGAAGTAGAGATGGGAGCACTGATTTTCCATCTGATTCTGGGGCAAGTGACATGAATGCCAGCAGTGACTCTATTGGTACAAGTGATTGGGCTGATAAAATCAAAGATACTTGGCAGAGTGTGGTGGAGACAGTAACATATTCTGCACAAAAGGTTAAAGACGCCTCTGATGAGCTGACTCCATATGCTCAACAGTTGCTCAATTCACATCCATACCTTAATGATGTGGTTATTCCAGTTGGTGGTACATTGACTGCTACACTCATAGCGTGGATTGTGATGCCTCGGATTTTAAGGAAATTTCACAAGTATGCAATGCAAGGCCCTGCTGCAATATTTCCAGGAAGCACAGCTGAGGAGCAAGTTCCTTATGGGAAAAGCTTTTGGGGTGCTATGGAGGATCCAGTACGATATTTGGTTACCTTCATGGCATTCGCACACATTGGTGTTGTGGTAGCTCCAACATCTGTAGCCTCGCAATACCTGACACAGGCTTGGAGGGGTGCAGTGATCCTTTCATTTGTGTGGTTTTTGTATCGATGGAAAACAAATGTCTTGACACGTATTTTGTCTAGTCAAAAGTTGCTCAGGCTTGATCGGGATAAATTGCTCACTCTAGACAAAATATCATCTGTTGGTCTATTTGTGATTGGTATAATGGCTTTAGCCGAGGCTTGTGGTGTGGCTGTGCAATCTATTATAACTGTTGGTGGTATAGGAGGAGTTGCCACTGCTTTTGCTGCCAGAGACATACTTGGCAATGTATTCAGTGGGTTGTCTATGCAATTTTCAAAGCCCTTTACAGTTGGAGATACAATAAAAGCTGGCTCGGTAGAGGGTCAGGTGGTGGAAATGGGACTTACTACTACATCATTACTAAATGCTGAGAAGTTCCCAGTTGTAGTACCAAACTCACTTTTTTCTAGCGAGGTAATCGTGAATAAGTCCCGTGCTGAATGTCGAGCCATCATATCTAAAATTCCTTTGCGAATTGAGGATATAAATAGAATTCCCAAGATATCAAATGACATAAAGAGTATGCTAGGAACAAATACCAAGGTTTTCTTGGAGAAAGAGGTCCCTTACTGTTACTTGTCTCGCATTGAAAGCTCATATGCAGAATTGACTCTTGGATACAACCTCAAGCACATGCGTAAAGATGAGCTGTACTCTGCAGAACAAGATATTCTCCTGCAGGCAGCCCAGATTATTAAGATGAATGGTGCTGAAGTTGGCAGTACCTGTCAAAACATGCCTTAG 1632 0.4216 MAGTRFSYLKRLQKYSVKGSFNVELVQPNKHIMNLTRCMDCVHSRFLSNSFSQAYSKRESQLPEHIAKNQFRTMTYGSSNPFNTKPGDSFSPKFSSFSLHKALPFASMTLLLNHRPYSSSLSGKGSRDGSTDFPSDSGASDMNASSDSIGTSDWADKIKDTWQSVVETVTYSAQKVKDASDELTPYAQQLLNSHPYLNDVVIPVGGTLTATLIAWIVMPRILRKFHKYAMQGPAAIFPGSTAEEQVPYGKSFWGAMEDPVRYLVTFMAFAHIGVVVAPTSVASQYLTQAWRGAVILSFVWFLYRWKTNVLTRILSSQKLLRLDRDKLLTLDKISSVGLFVIGIMALAEACGVAVQSIITVGGIGGVATAFAARDILGNVFSGLSMQFSKPFTVGDTIKAGSVEGQVVEMGLTTTSLLNAEKFPVVVPNSLFSSEVIVNKSRAECRAIISKIPLRIEDINRIPKISNDIKSMLGTNTKVFLEKEVPYCYLSRIESSYAELTLGYNLKHMRKDELYSAEQDILLQAAQIIKMNGAEVGSTCQNMP 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2586 543 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 154 538 - -
Prci12g2586 543 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 286 373 IPR011014 GO:0016020
Prci12g2586 543 Gene3D - 285 389 - -
Prci12g2586 543 Gene3D - 390 438 IPR023408 -
Prci12g2586 543 SUPERFAMILY Sm-like ribonucleoproteins 374 439 IPR010920 -
Prci12g2586 543 MobiDBLite consensus disorder prediction 119 149 - -
Prci12g2586 543 Pfam Mechanosensitive ion channel 332 534 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2586 Prci-Chr12 43322774 43328948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2586 83 541 Mechanosensitive Ion Channel Family AT4G00290 61.422 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2586 K22047 - gmx:100789047 699.508