Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2584 ATGGCCGGAGTAACGTTTTCCTGTCTGAAACGTCTCAAGAAATTATCAGCCAAGTGTTCTTTGAACTCAGAGCTAATTCAACCACATCACCGTATGATGAACCTTACTAGACGTGAGGATTGCGTTCATGTAAGCTTTCCGGGTATCTCACTGAGTCAAGCTTATTCCAAAGGAGAGTTACAGTTACATGACATTTTTGCCAAGAACCAGTTTAGAACTATGATTTCTGAAAACAGCAACCTCTTGAGTACCAAACCCAGTGCTTCATTTTCTCCTAAATTTTCCAGCTTTTGGCTCCACCATGCTCTTCCTTTCAGTTCAATGACCCTCTTGTTGAATCATCGGTCATATTCTTCGTCTCTGAGTGGCAAATTAAGTAGAGATGGAACCACAGATTTTGCACCTGATTCTATTGATGCAAGTGACTGGACTGATGAATTGACTCCATTTCTTCAACAGTTGCTCGACTCAAATCCTTACCTCAACGATGTGGTTATTCCGCTTGGTGGTACATTGACTGCCACTCTAATAGCATGGACTGTGATGCCTCTGATCTTGAGGAAATTTCACGAAAATGCATTGCAAAGTTCTGCAGCAACATTTCTGAGAAGCAAATATGGTGAGCAAGTTCCTTATGAGAAAAGCTTGTGGGGTGCTTTGGAGGATCCACTGCGATATTTGGTTACCTTCGTGGCATTCTCACAGATTTGTGTAATGGTAGCTCCAACAAGTGAAGCCCCACAGCAACTAGCAGAGGCATGGAGGGAGGCAGTAATGTTGTTATTTACGTGGTTTTTGCATCGATGGAAGACAAATATCTTGGGACACATGTCGTCAAGTCAAAGTTTACTTGGGCATGGTCAACATAAATTGCTTACTCTGGACAAAGTCTCATCTGCTGGTGTATTTGGGATTGGTACAATGGCTCTGGCCGAGGCTTGTGGTGTCTCTGTTCAATCTATTGCAACTGCTGGCTGCATAGGAGGACTTGCCACAGCCATTGCCGCCAGAGACGTCCTTGGCAATGCGTTCAGTGGATTGTGTATGCAGTTCACGGAGCCCTTTACAATTGGAGATACAATCAAAGCTGGGTCAGTGGAAGGAGAAGTTATTGAAATGGGAGTGACAAGCACATCATTGGTGAATGCCGAGAAGTTGACAGTGGTAGTGCCCAACTCATTTTTTTGCAGCGAGGTAGTGGTGATAAAGAGTCGAGTTGAATGGCACAGTATGATATCGAAGATTCCGGTGAGGGTTGAAGCGATAAATAGGATTTCCAGAATAAAAGATGATATAAAAAGTATGCTAGCAACAAACCCCAAGGTTTTGTCGGGGAAAGGGAGCCCTTACTGTTACTTGTCCCGCATTGAAACTTCATACGCAGAGTTGACACTTGGATACAACCTCAAACACATGGGCAAAGATGAGATGCGTGGGGCAGAACAAGACATCGTGGGGTTGGCTGTTGAGATTACCAAGAGGCACGCTGCTGAACTTGGCCTTCTCACCTCTTCTTCATCGGATTCTGACTGA 1533 0.4436 MAGVTFSCLKRLKKLSAKCSLNSELIQPHHRMMNLTRREDCVHVSFPGISLSQAYSKGELQLHDIFAKNQFRTMISENSNLLSTKPSASFSPKFSSFWLHHALPFSSMTLLLNHRSYSSSLSGKLSRDGTTDFAPDSIDASDWTDELTPFLQQLLDSNPYLNDVVIPLGGTLTATLIAWTVMPLILRKFHENALQSSAATFLRSKYGEQVPYEKSLWGALEDPLRYLVTFVAFSQICVMVAPTSEAPQQLAEAWREAVMLLFTWFLHRWKTNILGHMSSSQSLLGHGQHKLLTLDKVSSAGVFGIGTMALAEACGVSVQSIATAGCIGGLATAIAARDVLGNAFSGLCMQFTEPFTIGDTIKAGSVEGEVIEMGVTSTSLVNAEKLTVVVPNSFFCSEVVVIKSRVEWHSMISKIPVRVEAINRISRIKDDIKSMLATNPKVLSGKGSPYCYLSRIETSYAELTLGYNLKHMGKDEMRGAEQDIVGLAVEITKRHAAELGLLTSSSSDSD 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2584 510 Gene3D - 255 352 - -
Prci12g2584 510 SUPERFAMILY Sm-like ribonucleoproteins 338 400 IPR010920 -
Prci12g2584 510 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 144 503 - -
Prci12g2584 510 Pfam Mechanosensitive ion channel 296 493 IPR006685 GO:0016020|GO:0055085
Prci12g2584 510 Gene3D - 354 401 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2584 Prci-Chr12 43308969 43313129 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2584 126 500 Mechanosensitive Ion Channel Family AT4G00290 56.533 5.63e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2584 K22047 - gmx:100789047 515.383