Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2577 ATGTCAATCTACGATGCCACCTTCGTGGATACAGAGCTCTCCAAGAAGACCTCAATCTTTGGTCTCCGACTATGGGTTGTGATCGGAATCCTTGTCGGTTCTATTATTGTGCTCACTCTCTTCCTGCTGTCGCTCTGCCTCACCTCTCGCCGCCAAAGACGTCAAAAAAACCCTCAAGCCAACAAAACCCCTGTCGTTTCGAAGGAAATACAAGAGATCGTGCACATGCCCGCACCCAGTCAGCATCCAGTCCCTGAGATCCAAGTGGATTTCGGGAAAGCGGAGCACCGGCTCGTGGTTTTCTCCGATCGGGTCTCCAGCGGAGAGAGTAAGGGCGGTGCCACCAGTGCGTGTGAAACGACGTCCTCTTTTGGGAGTGGGAGTATTGGACCTGAGGTTTCGCATCTTGGGTGGGGGAGATGGTACACATTGAGGGAGCTGGAGGCTGCAACTAACAATCTGTGTGAAGAGAATGTGATTGGGGAGGGTGGGTACGGGATCGTTTACCATGGAGTGCTTGGTGACGGTACCAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAAAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGCCATAAGAATCTTGTTAGGTTGCTTGGCTACTGCGTTGAGGGGGCATACAGGATGCTCGTGTATGAGTATGTTGACAATGGCAACTTGGAACAGTGGCTTCATGGGGATGTTGGGTCTGTTAGCCCTTTGTCATGGGATATCCGCATAAACATTATATTGGGAACTGCTAAGGGACTGGCCTATCTCCATGAGGGTCTAGAACCAAAGGTTGTTCACCGAGATGTGAAATCTAGCAACATACTCCTTAATCGCCAATGGAACCCCAAGGTTTCAGATTTTGGACTTGCTAAACTCTTGTGTTCTGAGAGGAGTTATGTCACCACTCGAGTCATGGGGACATTTGGTTATGTTGCTCCAGAATATGCCTGCACTGGTATGTTGACTGAGAAGAGTGATGTTTATAGTTTTGGAATACTTATCATGGAGATAATTACTGGGAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTAAATCTAGTAGAATGGTTGAAAACAATGGTTGGGAATCGAAAATCTGAGGAAGTGGTTGATCCTAAGCTCCCGGAGATGCCATCTTCAAAGGCTCTTAAGCGTGCTCTGTTGGTTGCTCTTCGCTGTGTTGATCCTGATGGAACAAAAAGGCCTAAAATGGGGCATGTGATCCACATGCTTGAGGCAGACGACCTTTTATTCCGTGATGAACGCCGGATTGGAGGAGAATCTTCTAGCTCTCATCGTGATTTGATACAAGAGCATAAGGACTCAAATTCTGATAAAAAGCTTGTAGGCAGAGGTACCACTGATCAATCTCAAGAAGGTCATAGTAGGAATCAGCATCAGCCCACTATGTGGAGATAA 1461 0.4723 MSIYDATFVDTELSKKTSIFGLRLWVVIGILVGSIIVLTLFLLSLCLTSRRQRRQKNPQANKTPVVSKEIQEIVHMPAPSQHPVPEIQVDFGKAEHRLVVFSDRVSSGESKGGATSACETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNNLCEENVIGEGGYGIVYHGVLGDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGSVSPLSWDIRINIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNPKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQGEVNLVEWLKTMVGNRKSEEVVDPKLPEMPSSKALKRALLVALRCVDPDGTKRPKMGHVIHMLEADDLLFRDERRIGGESSSSHRDLIQEHKDSNSDKKLVGRGTTDQSQEGHSRNQHQPTMWR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2577 486 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Prci12g2577 486 PANTHER OS01G0323000 PROTEIN 7 453 - -
Prci12g2577 486 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Prci12g2577 486 Gene3D Phosphorylase Kinase; domain 1 130 229 - -
Prci12g2577 486 MobiDBLite consensus disorder prediction 441 462 - -
Prci12g2577 486 ProSiteProfiles Protein kinase domain profile. 154 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2577 486 FunFam Putative receptor-like serine/threonine-protein kinase 230 439 - -
Prci12g2577 486 SUPERFAMILY Protein kinase-like (PK-like) 132 426 IPR011009 -
Prci12g2577 486 MobiDBLite consensus disorder prediction 463 486 - -
Prci12g2577 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Prci12g2577 486 MobiDBLite consensus disorder prediction 441 486 - -
Prci12g2577 486 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
Prci12g2577 486 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2577 486 CDD STKc_IRAK 160 426 - -
Prci12g2577 486 Pfam Protein kinase domain 157 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2577 Prci-Chr12 43261476 43264381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2577 126 426 Receptor kinase-like Gene Family AT4G02010 47.213 1.15e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci12g2577 Pkinase 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2577 - - rcu:8286672 766.533